BLASTX nr result

ID: Angelica23_contig00043357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00043357
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002939688.1| PREDICTED: uncharacterized protein K02A2.6-l...    87   1e-15
gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-...    82   3e-14
gb|ABG37668.1| gag protein [Populus trichocarpa]                       81   1e-13
gb|ABG37657.1| integrase [Populus trichocarpa]                         81   1e-13
gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]      81   1e-13

>ref|XP_002939688.1| PREDICTED: uncharacterized protein K02A2.6-like [Xenopus (Silurana)
            tropicalis]
          Length = 1219

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/88 (46%), Positives = 55/88 (62%)
 Frame = +3

Query: 6    IDYMTKWDEAKSMRTINQQDCIQFMDIILMRFGLPRVLVSDNGPQFIGSDFESYLKERGI 185
            IDY +KW E   +  I     I F+  +  R G P+ L+SDNGPQF+ S+FE +L ER I
Sbjct: 1023 IDYYSKWPEIAFVSHITSATVITFLSTVFSREGNPKELISDNGPQFVSSEFEFFLSERNI 1082

Query: 186  KHKKSSVAYPQGNGQVEVTNRILLREIE 269
             H+KSSV YPQ NG++E  NR L   ++
Sbjct: 1083 VHRKSSVYYPQANGEIERFNRSLKEALQ 1110


>gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108708895|gb|ABF96690.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1547

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/89 (47%), Positives = 57/89 (64%)
 Frame = +3

Query: 3    AIDYMTKWDEAKSMRTINQQDCIQFMDIILMRFGLPRVLVSDNGPQFIGSDFESYLKERG 182
            AID  TKW EA   R I   + I+F+  I  RFGLP  +++DNG QFI +DF+ Y    G
Sbjct: 1402 AIDKFTKWIEATPTREIKADNAIKFIKGIFCRFGLPHRIITDNGSQFISADFQDYCIRLG 1461

Query: 183  IKHKKSSVAYPQGNGQVEVTNRILLREIE 269
            +K   +SV++PQ NGQVE  N I+L+ I+
Sbjct: 1462 VKICFASVSHPQSNGQVERANDIVLQGIK 1490


>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3    AIDYMTKWDEAKSMRTINQQDCIQFM-DIILMRFGLPRVLVSDNGPQFIGSDFESYLKER 179
            A+DY++KW EA   RT + +  I+F+ + IL RFG+PR ++SD G  F    FES +K+ 
Sbjct: 980  AVDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKY 1039

Query: 180  GIKHKKSSVAYPQGNGQVEVTNRILLREIEK 272
            GI HK ++  +PQ +GQVE+ NR + + +EK
Sbjct: 1040 GITHKVATPYHPQTSGQVELANREIKQILEK 1070



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   IDYMTKWDEAKSMRTINQQDCIQFM-DIILMRFGLPRVLVSDNGPQFIGSDFESYLKERG 182
           +DY++KW EA   RT + +  I+F+ + IL RFG+PR ++SD G  F    FES +K+ G
Sbjct: 732 VDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYG 791

Query: 183 IKHKKSSVAYPQGNGQVEVTNRIL 254
           I HK ++  +PQ +GQ +   R++
Sbjct: 792 ITHKVATPYHPQTSGQKDSKARLV 815


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3    AIDYMTKWDEAKSMRTINQQDCIQFM-DIILMRFGLPRVLVSDNGPQFIGSDFESYLKER 179
            A+DY++KW EA   RT + +  I+F+ + IL RFG+PR ++SD G  F    FES +K+ 
Sbjct: 832  AVDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKY 891

Query: 180  GIKHKKSSVAYPQGNGQVEVTNRILLREIEK 272
            GI HK ++  +PQ +GQVE+ NR + + +EK
Sbjct: 892  GITHKVATPYHPQTSGQVELANREIKQILEK 922



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   IDYMTKWDEAKSMRTINQQDCIQFM-DIILMRFGLPRVLVSDNGPQFIGSDFESYLKERG 182
           +DY++KW EA   RT + +  I+F+ + IL RFG+PR ++SD G  F    FES +K+ G
Sbjct: 584 VDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYG 643

Query: 183 IKHKKSSVAYPQGNGQVEVTNRIL 254
           I HK ++  +PQ +GQ +   R++
Sbjct: 644 ITHKVATPYHPQTSGQKDSKARLV 667


>gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1723

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/89 (47%), Positives = 56/89 (62%)
 Frame = +3

Query: 3    AIDYMTKWDEAKSMRTINQQDCIQFMDIILMRFGLPRVLVSDNGPQFIGSDFESYLKERG 182
            AID  TKW EA  M  I   + I+F+  I  R+GLP  +++DN  QFI SDF  Y  E G
Sbjct: 1464 AIDKFTKWIEATPMGEIKADNAIKFIRRIFCRYGLPHRIITDNDSQFISSDFHDYCIELG 1523

Query: 183  IKHKKSSVAYPQGNGQVEVTNRILLREIE 269
            +K   +SV++PQ NGQVE  N I+L+ I+
Sbjct: 1524 VKICFASVSHPQSNGQVERANSIVLQGIK 1552


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