BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00043298
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...    54   1e-05
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      54   1e-05

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
 Frame = -1

Query: 280 SLPELHNMLKTAESNFPSKKSSVLLIGEGSXXXXXXXXXXXXXXXXXXXXXXXXXEDPKS 101
           +L ELH MLKTAE +     + V+++ + S                         + PK+
Sbjct: 190 NLTELHMMLKTAEGSVKKCNNHVIMV-QKSTSFKKKAKTWIKKKGKAKVSDKIQTDKPKT 248

Query: 100 KA--------VCFHCNKVGHWKRNCKVYLAELKNKKGSETA 2
           K          CF+C ++GHWKRNCK YLA+ K   G++T+
Sbjct: 249 KTKSGPTQENECFYCKELGHWKRNCKKYLADQKRNGGTKTS 289


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -1

Query: 280 SLPELHNMLKTAESNFPSKKSSVLLIGEGSXXXXXXXXXXXXXXXXXXXXXXXXXEDPK- 104
           +L ELH MLKT E +       V+++                             +  K 
Sbjct: 187 TLAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAKKGKK 246

Query: 103 ----SKAVCFHCNKVGHWKRNCKVYLAELKNKKGSETA 2
               S AVCF+C + GHWKRNCK Y+ +LK K+ + +A
Sbjct: 247 GSAASDAVCFYCKETGHWKRNCKKYMEDLKKKQSTTSA 284