BLASTX nr result

ID: Angelica23_contig00043259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00043259
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...    79   5e-13
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...    76   2e-12
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...    76   3e-12
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...    76   3e-12
ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/83 (46%), Positives = 60/83 (72%)
 Frame = -2

Query: 338 MHIILTSSAISDVNAREFNRKPLIQVLDIEIRTTNQKQQQHFLVISDGMLTQEDVLANRL 159
           M + LT +AI+ +N  + N KPL+QVLDI++      Q+++  ++SD + TQ+ +LA +L
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKL--IGNSQERYRFLLSDAVATQQAMLATQL 58

Query: 158 NEQVKSGRVVTGSVVQLIDYFCS 90
           N++VKSG+V  GSV+QLIDY CS
Sbjct: 59  NDRVKSGQVRKGSVIQLIDYICS 81


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
 Frame = -2

Query: 338 MHIILTSSAISDVNAREFNRKPLIQVLDIEI--RTTNQKQQQHFLVISDGMLTQEDVLAN 165
           M + LT +AI+ +N  + N KPL+QVL+I++  R+  + Q+++  +ISDG+  Q  ++A 
Sbjct: 1   MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 164 RLNEQVKSGRVVTGSVVQLIDYFCS 90
           +LN++VKSG+V  GS+VQLIDY CS
Sbjct: 61  QLNDRVKSGQVEKGSIVQLIDYICS 85


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/83 (48%), Positives = 59/83 (71%)
 Frame = -2

Query: 338 MHIILTSSAISDVNAREFNRKPLIQVLDIEIRTTNQKQQQHFLVISDGMLTQEDVLANRL 159
           M + LT +AIS + A + N KPL+QVLDI++      Q+++ L+ISD +  ++ +LA +L
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKL--IGNAQERYSLLISDAVSAEQAMLATQL 58

Query: 158 NEQVKSGRVVTGSVVQLIDYFCS 90
           N+ VK+GRV  GSV+QLIDY CS
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCS 81


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/83 (48%), Positives = 59/83 (71%)
 Frame = -2

Query: 338 MHIILTSSAISDVNAREFNRKPLIQVLDIEIRTTNQKQQQHFLVISDGMLTQEDVLANRL 159
           M + LT +AIS + A + N KPL+QVLDI++      Q+++ L+ISD +  ++ +LA +L
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKL--IGNAQERYSLLISDAVSAEQAMLATQL 58

Query: 158 NEQVKSGRVVTGSVVQLIDYFCS 90
           N+ VK+GRV  GSV+QLIDY CS
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCS 81


>ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|222872440|gb|EEF09571.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/83 (46%), Positives = 57/83 (68%)
 Frame = -2

Query: 338 MHIILTSSAISDVNAREFNRKPLIQVLDIEIRTTNQKQQQHFLVISDGMLTQEDVLANRL 159
           M + LT +AI+ +N  + N KPL+QVLDI  +     Q++  L++SD +LTQ  +L  +L
Sbjct: 1   MPVNLTPNAIAMINGGDVNLKPLVQVLDI--KQMGSAQERFRLLVSDSVLTQHAMLGTQL 58

Query: 158 NEQVKSGRVVTGSVVQLIDYFCS 90
           N++VK+G V  GSV+QLIDY CS
Sbjct: 59  NDRVKTGLVKKGSVIQLIDYICS 81


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