BLASTX nr result

ID: Angelica23_contig00042453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042453
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...   131   6e-29
emb|CBI30076.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217...   119   2e-25
ref|XP_002533678.1| RNA binding protein, putative [Ricinus commu...   119   2e-25
ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcr...   119   3e-25

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/97 (67%), Positives = 84/97 (86%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   SAILMNVYFDKFDKEIQELRLQTNMENPRVKSDD-----NVYHKPLKIYAVRYLDEILVI 166
           S+IL+NVYF+ FDKEIQ+LR++TN ENPR  S++     +V++KP+KIYAVRYLDEILVI
Sbjct: 248 SSILINVYFNGFDKEIQDLRIRTNQENPRFDSNEVLSGSSVFYKPVKIYAVRYLDEILVI 307

Query: 167 TSGTKMLTMDLKHKILSFLENDLELKVDRVRSAIHSA 277
           TSG+KMLTMDLK++++ FLE  LELKVDR++ AIHSA
Sbjct: 308 TSGSKMLTMDLKNQVMKFLEGKLELKVDRLKMAIHSA 344


>emb|CBI30076.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/97 (67%), Positives = 84/97 (86%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   SAILMNVYFDKFDKEIQELRLQTNMENPRVKSDD-----NVYHKPLKIYAVRYLDEILVI 166
           S+IL+NVYF+ FDKEIQ+LR++TN ENPR  S++     +V++KP+KIYAVRYLDEILVI
Sbjct: 224 SSILINVYFNGFDKEIQDLRIRTNQENPRFDSNEVLSGSSVFYKPVKIYAVRYLDEILVI 283

Query: 167 TSGTKMLTMDLKHKILSFLENDLELKVDRVRSAIHSA 277
           TSG+KMLTMDLK++++ FLE  LELKVDR++ AIHSA
Sbjct: 284 TSGSKMLTMDLKNQVMKFLEGKLELKVDRLKMAIHSA 320


>ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217546 [Cucumis sativus]
          Length = 751

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/92 (64%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
 Frame = +2

Query: 5   AILMNVYFDKFDKEIQELRLQTNMENPRVKSDDNV-YHKPLKIYAVRYLDEILVITSGTK 181
           +IL+N+YF+ FDKEIQ +RLQ   ENP+   D+ V +H P+KIYAVRYLDEILVITSG+K
Sbjct: 310 SILLNIYFNGFDKEIQRIRLQKIEENPKFNLDEIVSFHNPVKIYAVRYLDEILVITSGSK 369

Query: 182 MLTMDLKHKILSFLENDLELKVDRVRSAIHSA 277
           MLTM+LK ++L +LE +LEL+VDR+ +AIHSA
Sbjct: 370 MLTMELKSQVLKYLEGNLELEVDRMNTAIHSA 401


>ref|XP_002533678.1| RNA binding protein, putative [Ricinus communis]
           gi|223526429|gb|EEF28708.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 751

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/95 (62%), Positives = 77/95 (81%), Gaps = 5/95 (5%)
 Frame = +2

Query: 8   ILMNVYFDKFDKEIQELRLQTNMENPRVKSDD-----NVYHKPLKIYAVRYLDEILVITS 172
           IL+N+YF+ FDKEIQ++RL+ + +NP+ + ++     N   KPLK+YA+RYLDEILVITS
Sbjct: 244 ILINIYFNGFDKEIQQIRLRISEQNPKFEPNEVSERSNSSFKPLKVYAIRYLDEILVITS 303

Query: 173 GTKMLTMDLKHKILSFLENDLELKVDRVRSAIHSA 277
           G+KMLTMDLK K+L FLE  LELKVDR+ +AIHSA
Sbjct: 304 GSKMLTMDLKSKVLKFLEEKLELKVDRIETAIHSA 338


>ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcriptase) [Arabidopsis
           thaliana] gi|332003308|gb|AED90691.1| RNA-directed DNA
           polymerase (reverse transcriptase) [Arabidopsis
           thaliana]
          Length = 695

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/96 (63%), Positives = 77/96 (80%), Gaps = 5/96 (5%)
 Frame = +2

Query: 5   AILMNVYFDKFDKEIQELRLQTNMENPRVKSDD-----NVYHKPLKIYAVRYLDEILVIT 169
           +IL+NVYFD  DKEIQ+LRL+  ++NPRV + D     NV+ KP+ IYAVRYLDEILVIT
Sbjct: 250 SILINVYFDGLDKEIQDLRLKMKVKNPRVGTGDEESTGNVFFKPVNIYAVRYLDEILVIT 309

Query: 170 SGTKMLTMDLKHKILSFLENDLELKVDRVRSAIHSA 277
           SG+KMLTMDLK +I+  LE  LEL+VDR+ ++IHSA
Sbjct: 310 SGSKMLTMDLKKRIVDILEQRLELRVDRLNTSIHSA 345


Top