BLASTX nr result

ID: Angelica23_contig00042379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042379
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...    68   7e-10
gb|EEC66519.1| hypothetical protein OsI_32638 [Oryza sativa Indi...    68   7e-10
ref|NP_001064090.1| Os10g0128200 [Oryza sativa Japonica Group] g...    68   7e-10
gb|AAP51971.2| F-box domain containing protein, expressed [Oryza...    68   7e-10
gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica...    66   3e-09

>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +2

Query: 56   KARIILEDE-GEDRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
            +AR  +ED  G DR+S LPDE++H+IMSFL+A+QAVQT +L++RW+ +W T+P
Sbjct: 1412 RARPPMEDAAGRDRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVP 1464


>gb|EEC66519.1| hypothetical protein OsI_32638 [Oryza sativa Indica Group]
          Length = 411

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +2

Query: 56  KARIILEDE-GEDRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
           +AR  +ED  G DR+S LPDE++H+IMSFL+A+QAVQT +L++RW+ +W T+P
Sbjct: 4   RARPPMEDAAGRDRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVP 56


>ref|NP_001064090.1| Os10g0128200 [Oryza sativa Japonica Group]
           gi|113638699|dbj|BAF26004.1| Os10g0128200, partial
           [Oryza sativa Japonica Group]
          Length = 421

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +2

Query: 56  KARIILEDE-GEDRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
           +AR  +ED  G DR+S LPDE++H+IMSFL+A+QAVQT +L++RW+ +W T+P
Sbjct: 14  RARPPMEDAAGRDRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVP 66


>gb|AAP51971.2| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|222612381|gb|EEE50513.1| hypothetical protein
           OsJ_30603 [Oryza sativa Japonica Group]
          Length = 411

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +2

Query: 56  KARIILEDE-GEDRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
           +AR  +ED  G DR+S LPDE++H+IMSFL+A+QAVQT +L++RW+ +W T+P
Sbjct: 4   RARPPMEDAAGRDRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVP 56


>gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica Group]
           gi|31429988|gb|AAP51965.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 949

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = +2

Query: 47  AKKKARIILEDEGEDRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
           A++K +      G D IS LPDE++H+IMSFL+A+QAVQT +L++RW+ +W T+P
Sbjct: 535 ARRKVKTPAHAAGMDWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTVP 589



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = +2

Query: 89  DRISGLPDEVIHKIMSFLDAKQAVQTSILAKRWKLIWTTLP 211
           DRISGLPD+++H IMSFL+ +QAVQT +L++RW+ +W T+P
Sbjct: 90  DRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRTMP 130


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