BLASTX nr result

ID: Angelica23_contig00042367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042367
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   195   4e-48
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   194   5e-48
ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation spec...   194   6e-48

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/105 (87%), Positives = 101/105 (96%)
 Frame = -2

Query: 316 GDTSIVYTGDYNMTPDRHLGAAQIDRLHLDLLISESTYGTTVRDSKYAREREFLNAVHKC 137
           GD+++VYTGDYNMTPDRHLGAAQIDRL LDLLI+ESTY TT+RDSKYAREREFL AVH+C
Sbjct: 168 GDSAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYAREREFLKAVHEC 227

Query: 136 VSSGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYFSAGLTL 2
           V+ GGKVLIPTFALGRAQELCILLDDYWERM+LKVPIYFSAGLT+
Sbjct: 228 VAGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTI 272


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  195 bits (495), Expect = 4e-48
 Identities = 93/105 (88%), Positives = 100/105 (95%)
 Frame = -2

Query: 316  GDTSIVYTGDYNMTPDRHLGAAQIDRLHLDLLISESTYGTTVRDSKYAREREFLNAVHKC 137
            GD ++VYTGDYNMTPDRHLGAAQIDRL LDLLI+ESTY TTVRDSKYAREREFL AVHKC
Sbjct: 1417 GDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLKAVHKC 1476

Query: 136  VSSGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYFSAGLTL 2
            V+ GGKVLIPTFALGRAQELCILLD+YWERM+LKVPIYFSAGLT+
Sbjct: 1477 VADGGKVLIPTFALGRAQELCILLDNYWERMNLKVPIYFSAGLTI 1521


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  195 bits (495), Expect = 4e-48
 Identities = 93/105 (88%), Positives = 100/105 (95%)
 Frame = -2

Query: 316 GDTSIVYTGDYNMTPDRHLGAAQIDRLHLDLLISESTYGTTVRDSKYAREREFLNAVHKC 137
           GD ++VYTGDYNMTPDRHLGAAQIDRL LDLLI+ESTY TTVRDSKYAREREFL AVHKC
Sbjct: 223 GDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLKAVHKC 282

Query: 136 VSSGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYFSAGLTL 2
           V+ GGKVLIPTFALGRAQELCILLD+YWERM+LKVPIYFSAGLT+
Sbjct: 283 VADGGKVLIPTFALGRAQELCILLDNYWERMNLKVPIYFSAGLTI 327


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  194 bits (494), Expect = 5e-48
 Identities = 91/105 (86%), Positives = 100/105 (95%)
 Frame = -2

Query: 316 GDTSIVYTGDYNMTPDRHLGAAQIDRLHLDLLISESTYGTTVRDSKYAREREFLNAVHKC 137
           GD+++VYTGDYNMTPDRHLGAAQIDRL LDLLI+ESTY TT+RDSKYAREREFL  VHKC
Sbjct: 168 GDSAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYAREREFLKVVHKC 227

Query: 136 VSSGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYFSAGLTL 2
           V+ GGKVLIPTFALGRAQELC+LLDDYWERM+LKVPIYFSAGLT+
Sbjct: 228 VAGGGKVLIPTFALGRAQELCLLLDDYWERMNLKVPIYFSAGLTI 272


>ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Glycine max]
          Length = 516

 Score =  194 bits (493), Expect = 6e-48
 Identities = 92/105 (87%), Positives = 99/105 (94%)
 Frame = -2

Query: 316 GDTSIVYTGDYNMTPDRHLGAAQIDRLHLDLLISESTYGTTVRDSKYAREREFLNAVHKC 137
           GD  +VYTGDYNMTPDRHLGAAQIDRL LDLLI+ESTY TT+RDS+YAREREFL AVHKC
Sbjct: 168 GDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKC 227

Query: 136 VSSGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYFSAGLTL 2
           VS GGKVLIPTFALGRAQELCILL+DYWERM+LKVPIYFSAGLT+
Sbjct: 228 VSCGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTI 272


Top