BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042336
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    76   3e-12
gb|ACB28472.1| polyprotein [Ananas comosus]                            70   2e-10
gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Ja...    70   2e-10
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap...    70   2e-10
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      69   3e-10

>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = -3

Query: 400  IRTLPLGSYDLVLGVDWFGSLGPVTFDFKNLLLQFQQDGKLVTLKGNV--ASAKPRLQQM 227
            ++ LPL SYD++LG+DW     P+  D++   ++F  DG+L+TL G V   SA P L  +
Sbjct: 827  LKVLPLQSYDMILGMDWLERYSPMDIDWQQKTIRFTLDGQLITLCGVVPSVSANPVLSVL 886

Query: 226  SAQEFVRSYERQEHGFLYVLFSKPVSDSTTSMEQGSKVKVEAGEHTPNTEQLQHLLKEYG 47
               +  +S   +    LY L S+  SD                   P  + +Q LL+ + 
Sbjct: 887  ELHQLYQSGSIEGLVQLYTLDSESSSD------------------LPIPDNIQQLLQSFA 928

Query: 46   DLFQQPEGLPPHRE 5
            D+FQ+P+GLPP RE
Sbjct: 929  DVFQEPQGLPPVRE 942


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/128 (30%), Positives = 68/128 (53%)
 Frame = -3

Query: 391 LPLGSYDLVLGVDWFGSLGPVTFDFKNLLLQFQQDGKLVTLKGNVASAKPRLQQMSAQEF 212
           LPL   D+VLGV W   LGP+ +DF  L ++FQ  G+ + L+G+   +   ++    ++ 
Sbjct: 89  LPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVLRGSSGPSLKIIEGKQLKKM 148

Query: 211 VRSYERQEHGFLYVLFSKPVSDSTTSMEQGSKVKVEAGEHTPNTEQLQHLLKEYGDLFQQ 32
           V          L  + + P   +  +  + ++    +G     ++QLQ LL+E+ DLF++
Sbjct: 149 VLDDTALSAVHLCSIHATPQEGNHIATSEDAET-TWSGLGKAYSQQLQLLLEEHSDLFEE 207

Query: 31  PEGLPPHR 8
           P+GLPP R
Sbjct: 208 PQGLPPVR 215


>gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
          Length = 954

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/133 (31%), Positives = 70/133 (52%)
 Frame = -3

Query: 406 TFIRTLPLGSYDLVLGVDWFGSLGPVTFDFKNLLLQFQQDGKLVTLKGNVASAKPRLQQM 227
           T ++ L LGSYD++LG+DW  +  P+  D+ N LL      + +TL+G + S   +  Q+
Sbjct: 484 TDLKVLNLGSYDMILGMDWLMAHSPMQVDWVNKLLTVSWRKESITLQG-ILSETEQCSQL 542

Query: 226 SAQEFVRSYERQEHGFLYVLFSKPVSDSTTSMEQGSKVKVEAGEHTPNTEQLQHLLKEYG 47
           S+Q+F+   +RQ    L  L         T  E  +K ++          ++Q +L E+G
Sbjct: 543 SSQQFLELKDRQAISHLIQL--------CTLSESSNKEQIPV--------EIQQVLAEFG 586

Query: 46  DLFQQPEGLPPHR 8
            +F++P GLPP R
Sbjct: 587 QVFEEPSGLPPSR 599


>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1065

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/133 (31%), Positives = 70/133 (52%)
 Frame = -3

Query: 406 TFIRTLPLGSYDLVLGVDWFGSLGPVTFDFKNLLLQFQQDGKLVTLKGNVASAKPRLQQM 227
           T ++ L LGSYD++LG+DW  +  P+  D+ N LL      + +TL+G + S   +  Q+
Sbjct: 548 TDLKVLNLGSYDMILGMDWLMAHSPMQVDWVNKLLTVSWRKESITLQG-ILSETEQCSQL 606

Query: 226 SAQEFVRSYERQEHGFLYVLFSKPVSDSTTSMEQGSKVKVEAGEHTPNTEQLQHLLKEYG 47
           S+Q+F+   +RQ    L  L         T  E  +K ++          ++Q +L E+G
Sbjct: 607 SSQQFLELKDRQAISHLIQL--------CTLSESSNKEQIPV--------EIQQVLAEFG 650

Query: 46  DLFQQPEGLPPHR 8
            +F++P GLPP R
Sbjct: 651 QVFEEPSGLPPSR 663


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
 Frame = -3

Query: 406 TFIRTLPLGSYDLVLGVDWFGSLGPVTFDFKNLLLQFQQDGKLVTLKGNVASA-----KP 242
           T +RTLPL  +D+VLGV W  +LGP+ +DF  L ++F  +G    L+G   +        
Sbjct: 545 TEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNGAKYILRGTAKAGCKVIKGN 604

Query: 241 RLQQMSAQE----FVRSYERQEHGFLYVLFSKPVSDSTTSMEQGSKVKVEAGEHTPNTEQ 74
           +L ++ +QE    F++ Y+ +    +    S    D +TS+   +               
Sbjct: 605 KLNKILSQEPQVAFLQLYDPESATSVGASLSHIAVDESTSLSDAT--------------- 649

Query: 73  LQHLLKEYGDLFQQPEGLPPHRE 5
           LQ LL+ Y DLF +P GLPP R+
Sbjct: 650 LQALLEAYEDLFIEPTGLPPFRK 672