BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042326
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA92870.2| retrotransposon protein, putative, unclassified [...    34   2e-06
gb|AAX96513.1| retrotransposon protein, putative, unclassified [...    34   2e-06
gb|AAX96796.1| retrotransposon protein, putative, unclassified [...    34   2e-06

>gb|ABA92870.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 621

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -2

Query: 286 ISSNISTSTLELLVHWDSQTAKEATWKEAAQLQQVCLEFELGKE 155
           +   I+    E+L+HW+ + A EA+W+  A+ ++    F+L  E
Sbjct: 543 VRGRIARGVWEVLIHWEGKAASEASWENEAEFRRRYPAFQLEDE 586



 Score = 33.5 bits (75), Expect(3) = 2e-06
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 405 RIHKFFQISMLKAFHVEHRVTPPTLPHLFDSKVVPLP 295
           RIH  F + +LK FH E     P LP +   +V+P+P
Sbjct: 503 RIHDVFHVGVLKKFHGEPPEIVPALPAMAYGRVLPVP 539



 Score = 27.7 bits (60), Expect(3) = 2e-06
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 470 GPSKLLNKVGQVACDVDLPS 411
           GP K++ ++G+VAC + LP+
Sbjct: 481 GPYKVMERIGEVACRLQLPA 500


>gb|AAX96513.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 605

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -2

Query: 286 ISSNISTSTLELLVHWDSQTAKEATWKEAAQLQQVCLEFELGKE 155
           +   I+    E+L+HW+ + A EA+W+  A+ ++    F+L  E
Sbjct: 527 VRGRIARGVWEVLIHWEGKAASEASWENEAEFRRRYPAFQLEDE 570



 Score = 33.5 bits (75), Expect(3) = 2e-06
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 405 RIHKFFQISMLKAFHVEHRVTPPTLPHLFDSKVVPLP 295
           RIH  F + +LK FH E     P LP +   +V+P+P
Sbjct: 487 RIHDVFHVGVLKKFHGEPPEIVPALPAMAYGRVLPVP 523



 Score = 27.7 bits (60), Expect(3) = 2e-06
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 470 GPSKLLNKVGQVACDVDLPS 411
           GP K++ ++G+VAC + LP+
Sbjct: 465 GPYKVMERIGEVACRLQLPA 484


>gb|AAX96796.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 429

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -2

Query: 286 ISSNISTSTLELLVHWDSQTAKEATWKEAAQLQQVCLEFELGKE 155
           +   I+    E+L+HW+ + A EA+W+  A+ ++    F+L  E
Sbjct: 351 VRGRIARGVWEVLIHWEGKAASEASWENEAEFRRRYPAFQLEDE 394



 Score = 33.5 bits (75), Expect(3) = 2e-06
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 405 RIHKFFQISMLKAFHVEHRVTPPTLPHLFDSKVVPLP 295
           RIH  F + +LK FH E     P LP +   +V+P+P
Sbjct: 311 RIHDVFHVGVLKKFHGEPPEIVPALPAMAYGRVLPVP 347



 Score = 27.7 bits (60), Expect(3) = 2e-06
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 470 GPSKLLNKVGQVACDVDLPS 411
           GP K++ ++G+VAC + LP+
Sbjct: 289 GPYKVMERIGEVACRLQLPA 308