BLASTX nr result

ID: Angelica23_contig00042314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042314
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002305430.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subs...    80   2e-13
gb|AFM92063.1| RADIALIS, partial [Fedia cornucopiae]                   80   2e-13
gb|AFM92054.1| RADIALIS, partial [Fedia cornucopiae]                   80   2e-13

>ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|222850202|gb|EEE87749.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/44 (77%), Positives = 42/44 (95%)
 Frame = -2

Query: 290 WYNVAKAIGGKTAEEVKRHYEILVADIRRIENGNVPYPNYRTTG 159
           WYNVA+A+GGKTAEEVKRHYE+LV D++ IE+G+VP+PNYRTTG
Sbjct: 37  WYNVARAVGGKTAEEVKRHYELLVEDVKHIESGHVPFPNYRTTG 80


>ref|XP_002305430.1| predicted protein [Populus trichocarpa] gi|222848394|gb|EEE85941.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -2

Query: 290 WYNVAKAIGGKTAEEVKRHYEILVADIRRIENGNVPYPNYRTTG 159
           W+NVA+A+GGKTAEEVKRHYEILV D++ IE+G VP+PNYRTTG
Sbjct: 37  WHNVARAVGGKTAEEVKRHYEILVEDVKHIESGRVPFPNYRTTG 80


>ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314731|gb|EFH45154.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = -2

Query: 290 WYNVAKAIGGKTAEEVKRHYEILVADIRRIENGNVPYPNYRTTGG 156
           W NVAK +GGKT EEVKRHYE+LV DI  IENG+VP+PNYRT+GG
Sbjct: 37  WQNVAKVVGGKTTEEVKRHYELLVQDINNIENGHVPFPNYRTSGG 81


>gb|AFM92063.1| RADIALIS, partial [Fedia cornucopiae]
          Length = 41

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -2

Query: 290 WYNVAKAIGGKTAEEVKRHYEILVADIRRIENGNVPYPNYR 168
           WYNVA+A+GGKTAEEVKRHYE+LV D++ IENG VPYPNYR
Sbjct: 1   WYNVARAVGGKTAEEVKRHYELLVEDVKHIENGRVPYPNYR 41


>gb|AFM92054.1| RADIALIS, partial [Fedia cornucopiae]
          Length = 51

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -2

Query: 290 WYNVAKAIGGKTAEEVKRHYEILVADIRRIENGNVPYPNYR 168
           WYNVA+A+GGKTAEEVKRHYE+LV D++ IENG VPYPNYR
Sbjct: 11  WYNVARAVGGKTAEEVKRHYELLVEDVKHIENGRVPYPNYR 51


Top