BLASTX nr result

ID: Angelica23_contig00042301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042301
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   164   5e-39
ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-...   161   6e-38
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]        160   1e-37
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   159   2e-37
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              159   2e-37

>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/101 (78%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   DLAIDKSLKLEKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGD 180
           DL IDKSLKL+KGTQFGHVFRITKKEEPKVR++LN+H++VLETRKDGVKFTN+KL+ LGD
Sbjct: 499 DLPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLETRKDGVKFTNTKLKKLGD 558

Query: 181 QYQKIIDEYRKCQKEIVGRVVGTTASFGEVFEGIAVLLSEL 303
           +YQKI+DEY+ CQKE+V RVV T ASF EVFEG+A  LSEL
Sbjct: 559 RYQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSEL 599


>ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
           gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch
           repair protein MSH2-like [Cucumis sativus]
          Length = 938

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/101 (75%), Positives = 91/101 (90%)
 Frame = +1

Query: 1   DLAIDKSLKLEKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGD 180
           DL +DK+LKL+KGTQFGHVFRITKKEEPKVRKKL+THF+VLETRKDGVKFTN+KL+ LGD
Sbjct: 499 DLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNTKLKKLGD 558

Query: 181 QYQKIIDEYRKCQKEIVGRVVGTTASFGEVFEGIAVLLSEL 303
           QYQKI++EY+ CQK++V RV+ T +SF EVF  +A LLSEL
Sbjct: 559 QYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSEL 599


>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 942

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/101 (75%), Positives = 90/101 (89%)
 Frame = +1

Query: 1   DLAIDKSLKLEKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGD 180
           DL +DKSLKL+K T FGHVFRITKKEEPK+RK+LN+H+++LETRKDGVKFTN+KL+ LGD
Sbjct: 499 DLPVDKSLKLDKETTFGHVFRITKKEEPKIRKQLNSHYIILETRKDGVKFTNTKLKKLGD 558

Query: 181 QYQKIIDEYRKCQKEIVGRVVGTTASFGEVFEGIAVLLSEL 303
           QYQKI++EY+ CQKE+V RVV T ASF EVFEGIA  LSEL
Sbjct: 559 QYQKIVEEYKSCQKELVARVVQTAASFSEVFEGIAGSLSEL 599


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/101 (77%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   DLAIDKSLKLEKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGD 180
           DL +DKSLKLEKGTQFGHVFRITKKEEPK+RKKL   F+VLETRKDGVKFTN+KL+ LGD
Sbjct: 459 DLPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGD 518

Query: 181 QYQKIIDEYRKCQKEIVGRVVGTTASFGEVFEGIAVLLSEL 303
           QYQKI+DEY+ CQ+E+V RVV T A+F EVFE +A LLSEL
Sbjct: 519 QYQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSEL 559


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/101 (77%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   DLAIDKSLKLEKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGD 180
           DL +DKSLKLEKGTQFGHVFRITKKEEPK+RKKL   F+VLETRKDGVKFTN+KL+ LGD
Sbjct: 499 DLPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGD 558

Query: 181 QYQKIIDEYRKCQKEIVGRVVGTTASFGEVFEGIAVLLSEL 303
           QYQKI+DEY+ CQ+E+V RVV T A+F EVFE +A LLSEL
Sbjct: 559 QYQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSEL 599


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