BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042211
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ...    75   7e-12
ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|NP_194530.1| pentatricopeptide repeat-containing protein [Ar...    56   4e-06

>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/94 (45%), Positives = 66/94 (70%)
 Frame = +3

Query: 6   SFFHNVVELGLVPSEGTCNYLVQTLARSNEYNMVYQVFTRMTRVGISPNFLSLGAMIEFY 185
           S FH+ ++  L+PS  TCN+LV  LARS  Y + + V+ RMT V + P+F SL A+IE +
Sbjct: 60  SLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECF 119

Query: 186 VQEGKPELGVGVLGLIVKRSYSMNGYLGNVILKG 287
               KP+LG GV+GL++KR +++N ++ N++LKG
Sbjct: 120 ADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKG 153


>ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498244|gb|AES79447.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 770

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 6   SFFHNVVE--LGLVPSEGTCNYLVQTLARSNEYNMVYQVFTRMTRVGISPNFLSLGAMIE 179
           S FH+ ++     +PS  +CN L+  L ++  Y+ V  V ++M  V + P F SL A+IE
Sbjct: 43  SHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIE 102

Query: 180 FYVQEGKPELGVGVLGLIVKRSYSMNGYLGNVILKG 287
            +V   KP    GVLGLI+KR + +N Y  N++LKG
Sbjct: 103 SFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKG 138


>ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = +3

Query: 6   SFFHNVVELGLV--PSEGTCNYLVQTLARSNEYNMVYQVFTRMTRVGISPNFLSLGAMIE 179
           S FH  ++      PSE  C+ L+  L ++ +Y+ V  V+ +M    + P F SL A+ E
Sbjct: 26  SLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTE 85

Query: 180 FYVQEGKPELGVGVLGLIVKRSYSMNGYLGNVILKG 287
            +V    P     VL L+ KR + +N Y  N++LKG
Sbjct: 86  SFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKG 121


>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/95 (28%), Positives = 55/95 (57%)
 Frame = +3

Query: 3   FSFFHNVVELGLVPSEGTCNYLVQTLARSNEYNMVYQVFTRMTRVGISPNFLSLGAMIEF 182
           FS F++++++   P   + N L+  +A+   Y  V  ++ RM+ +G++P+F++L  +I  
Sbjct: 77  FSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINC 136

Query: 183 YVQEGKPELGVGVLGLIVKRSYSMNGYLGNVILKG 287
           Y    K + G+ VLG +++R +S N      ++KG
Sbjct: 137 YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171


>ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g28010 gi|4455360|emb|CAB36770.1| putative protein
           [Arabidopsis thaliana] gi|7269655|emb|CAB79603.1|
           putative protein [Arabidopsis thaliana]
           gi|332660020|gb|AEE85420.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +3

Query: 60  NYLVQTLARSNEYNMVYQVFTRMTRVGISPNFLSLGAMIEFYVQEGKPELGVGVLGLIVK 239
           N L+  L RS  + + +  + +M       NF+SL  ++E YVQ  K     GVL L++K
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 240 RSYSMNGYLGNVILKG 287
           R ++ N Y  N++LKG
Sbjct: 136 RGFAFNVYNHNILLKG 151