BLASTX nr result

ID: Angelica23_contig00042176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042176
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   164   9e-39
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   164   9e-39
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   164   9e-39
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   162   3e-38
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37

>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/128 (64%), Positives = 93/128 (72%)
 Frame = -1

Query: 385 VKDKNVLRLIKSGLRVRNGIQCGXXXXXXXXXXXXXXXXXXXXXKILNENEPKPDPYWLR 206
           VKDK +LRL+KS L+     +                       KILNENEPKPDPYWLR
Sbjct: 252 VKDKKILRLVKSALQSPRKTR-PRVEDNEEMMKKKKNKGAMKKKKILNENEPKPDPYWLR 310

Query: 205 TFFDFAPEEAVKVPNYGGCGILSPLLANICLNELDHMMEDKIVEFFRPSRLDSIWKDSAN 26
           TFF+FAPEEA KVP+YG CGILSPLLANICL+ELD +MEDKIVE+FRPS+LDSIWKDS N
Sbjct: 311 TFFNFAPEEAAKVPSYGHCGILSPLLANICLHELDLVMEDKIVEYFRPSKLDSIWKDSIN 370

Query: 25  DGSHNPSW 2
           DG HNP+W
Sbjct: 371 DGCHNPAW 378


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/128 (64%), Positives = 93/128 (72%)
 Frame = -1

Query: 385 VKDKNVLRLIKSGLRVRNGIQCGXXXXXXXXXXXXXXXXXXXXXKILNENEPKPDPYWLR 206
           VKDK +LRL+KS L+     +                       KILNENEPKPDPYWLR
Sbjct: 252 VKDKKILRLVKSALQSPRKTR-PRVEDNEEMMKKKKNKGAMKKKKILNENEPKPDPYWLR 310

Query: 205 TFFDFAPEEAVKVPNYGGCGILSPLLANICLNELDHMMEDKIVEFFRPSRLDSIWKDSAN 26
           TFF+FAPEEA KVP+YG CGILSPLLANICL+ELD +MEDKIVE+FRPS+LDSIWKDS N
Sbjct: 311 TFFNFAPEEAAKVPSYGHCGILSPLLANICLHELDLVMEDKIVEYFRPSKLDSIWKDSIN 370

Query: 25  DGSHNPSW 2
           DG HNP+W
Sbjct: 371 DGCHNPAW 378


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/130 (63%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
 Frame = -1

Query: 385 VKDKNVLRLIKS--GLRVRNGIQCGXXXXXXXXXXXXXXXXXXXXXKILNENEPKPDPYW 212
           VKDK VL LIK   G RVRN    G                      ILNENEPKPDP+W
Sbjct: 236 VKDKKVLGLIKLALGARVRNQAHGGDCDVTFGKKKKKKGPKKKK---ILNENEPKPDPFW 292

Query: 211 LRTFFDFAPEEAVKVPNYGGCGILSPLLANICLNELDHMMEDKIVEFFRPSRLDSIWKDS 32
           LR+FF FAPEEA KVP+YG CGILSPLLAN+CL+ELD+MME+KI++FFRPS+LDSIW+DS
Sbjct: 293 LRSFFSFAPEEAAKVPSYGHCGILSPLLANVCLSELDYMMEEKIIKFFRPSKLDSIWRDS 352

Query: 31  ANDGSHNPSW 2
            NDGSHNP+W
Sbjct: 353 INDGSHNPAW 362


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/134 (61%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = -1

Query: 397 VGNLVKDKNVLRLIKSGLR--VRNGIQCGXXXXXXXXXXXXXXXXXXXXXKILNENEPKP 224
           V  +VKDK VL L+K  L+  +RN                          +ILNENEPKP
Sbjct: 224 VEKVVKDKKVLNLVKDALKSPMRNQ---ELEKRSDRKELRKKKKKKATKKRILNENEPKP 280

Query: 223 DPYWLRTFFDFAPEEAVKVPNYGGCGILSPLLANICLNELDHMMEDKIVEFFRPSRLDSI 44
           DPYWLRTFFDFAPEEAV +PNYG CGILSPLLANICLNELD +ME+KIV+FFRP++ DSI
Sbjct: 281 DPYWLRTFFDFAPEEAVNIPNYGYCGILSPLLANICLNELDQIMEEKIVKFFRPNKSDSI 340

Query: 43  WKDSANDGSHNPSW 2
           WKDS +DG HNPSW
Sbjct: 341 WKDSIDDGCHNPSW 354


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/132 (60%), Positives = 91/132 (68%)
 Frame = -1

Query: 397 VGNLVKDKNVLRLIKSGLRVRNGIQCGXXXXXXXXXXXXXXXXXXXXXKILNENEPKPDP 218
           V  +V+DK VL LIK  L+    I+                       KILNENEPKPDP
Sbjct: 194 VEKVVRDKKVLNLIKKALKSPVRIR---EMGNYGEESRKKKKRKSTKKKILNENEPKPDP 250

Query: 217 YWLRTFFDFAPEEAVKVPNYGGCGILSPLLANICLNELDHMMEDKIVEFFRPSRLDSIWK 38
           YWLRTFFDFAPEEA K+P YG CGILSPLLAN+CLNELD MME+KIV+FFRP++LDSIWK
Sbjct: 251 YWLRTFFDFAPEEAAKIPTYGYCGILSPLLANVCLNELDQMMEEKIVDFFRPNKLDSIWK 310

Query: 37  DSANDGSHNPSW 2
            S +D  HNPSW
Sbjct: 311 HSIDDRCHNPSW 322


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