BLASTX nr result

ID: Angelica23_contig00042133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042133
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   112   2e-23
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18

>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   CDSAPFVFDLLVMSLLQAKRIDQAVEVARMLRSRGMFLKTSTCNDLIKCVCKSLDCFVGY 180
           CDSAPFVFDLL+ S L+ K+ID  +++ R+LRSRG+    STCN L+  V K   C+ GY
Sbjct: 156 CDSAPFVFDLLIKSCLELKKIDDGLKIVRLLRSRGISPLISTCNFLVSWVSKCKGCYAGY 215

Query: 181 DLYKEIFGVFGEGLDGKGVRVVVPNVHTFNVIMIGFYREGLVENVEE 321
            +++E+F V     +GK V  V PNVHTFN +M+GFYR+G +E VEE
Sbjct: 216 GVFREVFEV--NDNEGKRVIKVRPNVHTFNELMMGFYRDGELEMVEE 260


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 7/114 (6%)
 Frame = +1

Query: 1   CDSAPFVFDLLVMSLLQAKRIDQAVEVARMLRSRGMFLKTSTCNDLIKCVCKSLDCFVGY 180
           C SAPFVFDLL+ + L +KRI+Q++ + +MLRSRG+    STCN LI  V +   C  GY
Sbjct: 154 CGSAPFVFDLLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGY 213

Query: 181 DLYKEIFGVFGEGLDGKGVRV-------VVPNVHTFNVIMIGFYREGLVENVEE 321
           ++Y+E+FG + + ++ K VRV       V PNVHTFN +M+ FYR+G VE VEE
Sbjct: 214 EIYREVFGSWDDEINEK-VRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEE 266


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
 Frame = +1

Query: 1   CDSAPFVFDLLVMSLLQAKRIDQAVEVARMLRSRGMFLKTSTCNDLIKCVCKSLDCFVGY 180
           CDSAPFVFDLL+ S L+ K+ID ++E+ +MLRS+G+    STCN LI  V +    FVGY
Sbjct: 160 CDSAPFVFDLLIKSCLELKKIDGSIEIVKMLRSKGISPSISTCNALISEVSRCKGSFVGY 219

Query: 181 DLYKEIFGV----FGEGLDGKGVRVVVPNVHTFNVIMIGFYREGLVENVEE 321
            ++KE+FG+     GE +  +G R V PNVH+FN +M+GFYR G VE VEE
Sbjct: 220 GVFKEVFGLESCELGEKM-RRGFR-VRPNVHSFNELMVGFYRNGEVEMVEE 268


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/110 (47%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   CDSAPFVFDLLVMSLLQAKRIDQAVEVARMLRSRGMFLKTSTCNDLIKCVCKSLDCFVGY 180
           C SAPFVFDLL+ +LL +K++D ++E+ RMLRSRG+  + ST N LI  V K     V Y
Sbjct: 169 CGSAPFVFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAY 228

Query: 181 DLYKEIFGVFGEGLDGKGVRV---VVPNVHTFNVIMIGFYREGLVENVEE 321
            +++E+FG+  E ++ + V++   V PNVHTFN +M  FYR+G V  V+E
Sbjct: 229 AIFREVFGLDCE-IEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFVGRVKE 277


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/109 (48%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
 Frame = +1

Query: 7   SAPFVFDLLVMSLLQAKRIDQAVEVARMLRSRGMFLKTSTCNDLIKCVCKSLDCFVGYDL 186
           SAPFVFDLL+ + L +K++D ++E+ RML SRG+  K ST N LI  VCKS     GY +
Sbjct: 158 SAPFVFDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAI 217

Query: 187 YKEIFGVFGEGLD----GKGVRVVVPNVHTFNVIMIGFYREGLVENVEE 321
           Y+E F +  E  +    G G R V PNVHT+N +M+  Y++GLVE VE+
Sbjct: 218 YREFFRLDEENNEISKRGSGFR-VTPNVHTYNDLMLCCYQDGLVERVEK 265


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