BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042096
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   108   3e-22
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   105   4e-21

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  108 bits (271), Expect = 3e-22
 Identities = 72/140 (51%), Positives = 87/140 (62%), Gaps = 11/140 (7%)
 Frame = -1

Query: 388 GSSRRERPQRVVTKQPVVRPIRAP--VKVENRFSPLCVEE----SLVAPIKSKITYADVV 227
           G+ RRERP  V  K   VRPIR P  VK  NRF+PL V+E    ++ API  K +YAD +
Sbjct: 57  GNFRRERPLVVSHKTQQVRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADAL 116

Query: 226 RAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRAL 62
           R+   V P+  +KGVVTL+ET +DF LF D     + V  PGQT  EA +L REF KR L
Sbjct: 117 RSSAFVKPS-VRKGVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTL 175

Query: 61  VFSGRRLMPVGLPEGHSTDP 2
            FSGRRL   GLP G  +DP
Sbjct: 176 AFSGRRLSVSGLPSG--SDP 193


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  105 bits (262), Expect = 4e-21
 Identities = 72/135 (53%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
 Frame = -1

Query: 388 GSSRRERPQRVVTKQPVVRPIRAP--VKVENRFSPLCVEESL---VAPIK-SKITYADVV 227
           GS RRERP  V  K   VRPIR P  VK  NRF+ L V+E     VAP    K +YAD +
Sbjct: 57  GSFRRERPPVVSHKTQQVRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADAL 116

Query: 226 RAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRAL 62
           R+   V P+ A+KGVVTL+ET +DF LF D     + V  PGQT  EA SL REF KRA 
Sbjct: 117 RSSAFVKPS-ARKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAF 175

Query: 61  VFSGRRLMPVGLPEG 17
            FSG+RL   GLPEG
Sbjct: 176 AFSGKRLSVSGLPEG 190