BLASTX nr result

ID: Angelica23_contig00042073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042073
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26363.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   145   3e-33
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   141   6e-32
gb|AFK40333.1| unknown [Lotus japonicus]                              139   3e-31
ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycin...   138   4e-31

>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/93 (72%), Positives = 81/93 (87%)
 Frame = -2

Query: 280 LDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGEGRVRQHSGDVLFPVTFT 101
           LDAKGL LQ++II+RLLD F+ KKAT  LGYFL VT+L+ +GEG+VRQHSGDVLFPV F+
Sbjct: 83  LDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQHSGDVLFPVVFS 142

Query: 100 CMTYKAFAGEILEGEVHKILKHGVFLRCGPVEH 2
           C+T+K F GEIL+G VHK+LKHGV LRCGPVE+
Sbjct: 143 CVTFKLFRGEILDGVVHKVLKHGVILRCGPVEN 175


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/93 (72%), Positives = 81/93 (87%)
 Frame = -2

Query: 280 LDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGEGRVRQHSGDVLFPVTFT 101
           LDAKGL LQ++II+RLLD F+ KKAT  LGYFL VT+L+ +GEG+VRQHSGDVLFPV F+
Sbjct: 18  LDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQHSGDVLFPVVFS 77

Query: 100 CMTYKAFAGEILEGEVHKILKHGVFLRCGPVEH 2
           C+T+K F GEIL+G VHK+LKHGV LRCGPVE+
Sbjct: 78  CVTFKLFRGEILDGVVHKVLKHGVILRCGPVEN 110


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/93 (67%), Positives = 82/93 (88%)
 Frame = -2

Query: 280 LDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGEGRVRQHSGDVLFPVTFT 101
           LDAKGL LQ++II+RLL++FA+KKAT  LGY+L VT+L+ +GEG+VR+H+GDVLFPV F 
Sbjct: 18  LDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGEGKVREHTGDVLFPVVFN 77

Query: 100 CMTYKAFAGEILEGEVHKILKHGVFLRCGPVEH 2
            +T+K F GEILEG VHK+LKHGVF+RCGP+E+
Sbjct: 78  GITFKIFRGEILEGVVHKVLKHGVFIRCGPIEN 110


>gb|AFK40333.1| unknown [Lotus japonicus]
          Length = 180

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = -2

Query: 280 LDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGEGRVRQHSGDVLFPVTFT 101
           L    L LQ+AI++RLL +FAAK+AT  LGYF  VT+LDKVGEG+VRQH+GDVLFPV F 
Sbjct: 18  LQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGEGKVRQHTGDVLFPVVFN 77

Query: 100 CMTYKAFAGEILEGEVHKILKHGVFLRCGPVEH 2
            +T+K F GEILEG VHK+LKHGVFLRCGP+EH
Sbjct: 78  GVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEH 110


>ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycine max]
           gi|255633396|gb|ACU17055.1| unknown [Glycine max]
          Length = 180

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/93 (68%), Positives = 78/93 (83%)
 Frame = -2

Query: 280 LDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGEGRVRQHSGDVLFPVTFT 101
           L  +GL L +AIIVRLL +FA KKAT  LGYFL VT+L+K+GEG+VRQH+GDVLFPV F 
Sbjct: 18  LQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVTTLEKIGEGKVRQHTGDVLFPVVFN 77

Query: 100 CMTYKAFAGEILEGEVHKILKHGVFLRCGPVEH 2
            +T+K F GEILEG VHK+LKHGVF+RCGP+E+
Sbjct: 78  VITFKFFKGEILEGVVHKVLKHGVFMRCGPIEN 110


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