BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042071
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    64   2e-16
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...    64   1e-15
gb|ACB28472.1| polyprotein [Ananas comosus]                            60   1e-14
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    57   7e-14
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      53   2e-13

>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 63.9 bits (154), Expect(2) = 2e-16
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +2

Query: 2    QNSLKWMLQ*NISTCFQQFWLSKLMGFDCEIVYKSGAENVVADALSRKEGAEI 160
            Q SLK++L+  ++T  QQ WL KL+ FD EI Y+ G ENVVADALSR EG+E+
Sbjct: 964  QRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEV 1016



 Score = 46.6 bits (109), Expect(2) = 2e-16
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +1

Query: 178  VVSSEVSQSIKDSYQLDSSWLDVIHQLHQNVTFPG-FKLQDGLLRRNNKIVVGPNGDLKM 354
            VV  ++ + I+  Y  DS   D+I  L ++      F     +LRR +KIVV  N ++K 
Sbjct: 1023 VVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKN 1082

Query: 355  QLIKWYHSSPEARHVGRDLT 414
             ++ W H S    H GRD+T
Sbjct: 1083 TILLWLHGSGVGGHSGRDVT 1102


>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score = 63.9 bits (154), Expect(2) = 1e-15
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +2

Query: 2   QNSLKWMLQ*NISTCFQQFWLSKLMGFDCEIVYKSGAENVVADALSRKEGAEI 160
           Q SLK++L+  ++T  QQ WL KL+ FD EI YK G EN+VADALSR EG+E+
Sbjct: 355 QRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYKQGKENLVADALSRVEGSEV 407



 Score = 43.9 bits (102), Expect(2) = 1e-15
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +1

Query: 175 AVVSSEVSQSIKDSYQLDSSWLDVIHQLHQNV-TFPGFKLQDGLLRRNNKIVVGPNGDLK 351
           +VV  ++ + I+  Y  D     +I  L Q   +   +    G+LRR NKIVV  N  +K
Sbjct: 413 SVVECDLLKEIQAGYVTDGDIQGIITILQQQADSKKHYTWSQGVLRRKNKIVVPNNSGIK 472

Query: 352 MQLIKWYHSSPEARHVGRDLT 414
             +++W H S    H G+++T
Sbjct: 473 DTILRWLHCSGMGGHSGKEVT 493


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = +2

Query: 8   SLKWMLQ*NISTCFQQFWLSKLMGFDCEIVYKSGAENVVADALSR 142
           SLK++++  +ST  QQ W++KLMG+D E++YK G ENVVADALSR
Sbjct: 594 SLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVADALSR 638



 Score = 43.9 bits (102), Expect(2) = 1e-14
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +1

Query: 175 AVVSSEVSQSIKDSYQLDSSWLDVIHQLHQNV-TFPGFKLQDGLLRRNNKIVVGPNGDLK 351
           + + +++   IK S+ +D     +I Q   ++ ++P +      LRR  K+VVG +  LK
Sbjct: 646 SAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQDQLRRKGKLVVGSDPGLK 705

Query: 352 MQLIKWYHSSPEARHVGRDLTVK 420
           +QLI  +H+S    H G + T +
Sbjct: 706 LQLIHNFHASSIGGHSGMEATTR 728


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 57.4 bits (137), Expect(2) = 7e-14
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 8    SLKWMLQ*NISTCFQQFWLSKLMGFDCEIVYKSGAENVVADALSRKEGAEI 160
            SLK++L+  ++T  QQ W++KLM +D EI YK G ENV ADALSR + AE+
Sbjct: 927  SLKYLLEQRVTTPTQQAWVAKLMQYDYEISYKQGKENVAADALSRIQPAEL 977



 Score = 44.3 bits (103), Expect(2) = 7e-14
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +1

Query: 160  FVFCFAVVSSEVSQSIKDSYQLDSSWLDVIHQLHQNVT-FPGFKLQDGLLRRNNKIVVGP 336
            FV    ++++++   IK+S+ +D     +I     + + +P +  +   LRR  K+VVG 
Sbjct: 978  FVLSTTILNTQLYDLIKESWGVDPELQKIIKAKEADPSAYPKYSWRGEELRRKGKLVVGV 1037

Query: 337  NGDLKMQLIKWYHSSPEARHVGRDLTVK 420
            N  L+ +++  +H SP   H G  +T K
Sbjct: 1038 NEQLRREILNSFHDSPTGGHSGVYVTTK 1065


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 53.1 bits (126), Expect(2) = 2e-13
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = +2

Query: 35   ISTCFQQFWLSKLMGFDCEIVYKSGAENVVADALSRKEGAEI 160
            ++T FQ  WLSKLMG+  EI YK G EN  ADALSR  GA++
Sbjct: 1031 VTTPFQHMWLSKLMGYTYEIQYKQGKENHAADALSRVTGAQL 1072



 Score = 47.0 bits (110), Expect(2) = 2e-13
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
 Frame = +1

Query: 175  AVVSSEVSQSIKDSYQL----DSSWLDVIHQLHQN-VTFPGFKLQDGLLRRNNKIVVGPN 339
            ++  S   + + DS QL    D     VI  +  N  + P +   +  LRR  K+VVG +
Sbjct: 1074 SITLSHAHEGLFDSIQLLWQSDPHLSKVISDIKSNPASHPAYSFVNEELRRKGKLVVGND 1133

Query: 340  GDLKMQLIKWYHSSPEARHVGRDLTVK 420
              +K+ ++KW H S    H GRD T++
Sbjct: 1134 AAVKLHILKWMHDSVSGGHSGRDATLQ 1160