BLASTX nr result

ID: Angelica23_contig00041910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041910
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    60   2e-07
ref|XP_002278942.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    55   5e-06
ref|XP_003588814.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   6e-06

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   APNLKCLRQMYFSIDFDISCVGLEN---LEEYSFWLGSLGTLMETKTSNVVKVLGSLQRI 173
           APNLK      FS   D   +  +N   L E +  L  +   ++ ++SN++K+  SL  +
Sbjct: 239 APNLKS-----FSFTGDFGSICFKNTLLLAEVTVALCRVNKNVKHQSSNLIKIGRSLPAV 293

Query: 174 EKFSVAMEFMKYLAKGGCPNRLSEPLPYLKTLNVCDVNFNQLSEVYCLLCMIRSAPN 344
           EK  +   F+++LA G  P RL      LK L++ +++F+ L E+ C LC+I S+PN
Sbjct: 294 EKLYLEGYFLEFLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPN 350


>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 532

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   APNLKCLRQMYFSIDFDI-SCVGLENLEEYSFWLGSLGTLMETKTSNVVKVLGSLQRIEK 179
           APNLK    +   +DF   +   L  L  +SF   S  + +   +SN+++    L  IE 
Sbjct: 260 APNLKKFLIVGDFVDFSFDNTFQLTELGLFSFDSRSNHSQLRGCSSNLLRFFAHLPHIES 319

Query: 180 FSVAMEFMKYLAKGGCPNRLSEPLPYLKTLNVCDVNFNQLSEVYCLLCMIRSAPN 344
             ++ +F+KYL  G  P +L  P   L +L +C + FN L ++   LC++RS+PN
Sbjct: 320 LVISSQFLKYLDAGDVPVKLPTPCINLSSLFIC-IRFNDLKQILAALCLLRSSPN 373


>ref|XP_002278942.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 425

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 54/102 (52%)
 Frame = +3

Query: 39  SIDFDISCVGLENLEEYSFWLGSLGTLMETKTSNVVKVLGSLQRIEKFSVAMEFMKYLAK 218
           SID   + V LE        +    +L E K  N+ +VLG L  +++FS++  F++++  
Sbjct: 233 SIDIHPTSVNLE--------MNMFCSLEEWKACNLFRVLGCLSGVKRFSLSGHFLEFIGT 284

Query: 219 GGCPNRLSEPLPYLKTLNVCDVNFNQLSEVYCLLCMIRSAPN 344
              P RL E    L  L + +V+F  L+EV   L +++S+PN
Sbjct: 285 SNVPERLPERFNRLMALELREVSFKSLNEVMVFLAILQSSPN 326


>ref|XP_003588814.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477862|gb|AES59065.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 381

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
 Frame = +3

Query: 3   APNLKCLRQMYFSIDFDISCVGLENLEEYSFWLGSLGTLMETKT---------SNVVKVL 155
           AP+LK     +F I+ +   +  +N    +F L ++   M++K+         SN++K  
Sbjct: 194 APSLK-----FFEIEDEFESINFDN----TFQLATIFVYMKSKSNQGRLHGFSSNLLKFF 244

Query: 156 GSLQRIEKFSVAMEFMKYLAKGGCPNRLSEPLPYLKTLNVCD-VNFNQLSEVYCLLCMIR 332
             L RI+   +   F+KYLA G  P +L  P  ++   ++C  +NFN L ++  +LC+++
Sbjct: 245 DHLPRIQSLKIDDGFLKYLAAGIVPAKL--PTLFVNLRSICLWINFNDLKQISVVLCLLK 302

Query: 333 SAPN 344
           S+PN
Sbjct: 303 SSPN 306


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