BLASTX nr result

ID: Angelica23_contig00041872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041872
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]   124   8e-27
ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13
ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   2e-12
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12

>emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
          Length = 598

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = +1

Query: 1   MNARAGMLGNAHQFVKKMPIEPNAIIWRMLMNSCRVHNHFNLELNMVNALKILKTSTDPE 180
           M+ARAGML  A++FVK MP+EPNA++WRML+N+CRVH  FNL LN+V+ L  +KT   PE
Sbjct: 495 MHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFNLGLNLVSGLIDVKTEHGPE 554

Query: 181 DHVLISNIFAEAEKWDDVLCQRTVMLVQEASKV 279
           DHV+ SNIFAEA +WDDVL +R++M+ Q+A K+
Sbjct: 555 DHVISSNIFAEAGRWDDVLQERSLMVAQKAVKL 587


>ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +1

Query: 10  RAGMLGNAHQFVKKMPIEPNAIIWRMLMNSCRVHNHFNLELNMVNALKILKTS-TDPEDH 186
           RAGM+G+AH+F++ MPIEPN ++WR L+ +C+ H + +L  ++  + KILK   + PE++
Sbjct: 357 RAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHI--SRKILKLDPSSPENY 414

Query: 187 VLISNIFAEAEKWDDVLCQRTVMLVQEASK 276
           VL+SN++A   +W  V CQ   ++  +A K
Sbjct: 415 VLVSNVYASLGRWSSV-CQVRSLMKDKAPK 443


>ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Vitis vinifera]
          Length = 540

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +1

Query: 10  RAGMLGNAHQFVKKMPIEPNAIIWRMLMNSCRVHNHFNLELNMVNALKILKTS-TDPEDH 186
           RAGM+G+AH+F++ MPIEPN ++WR L+ +C+ H +  L  ++  + KILK   + PE++
Sbjct: 317 RAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHI--SRKILKLDPSSPENY 374

Query: 187 VLISNIFAEAEKWDDVLCQRTVMLVQEASK 276
           V +SN++A   +W  V CQ   ++ ++A K
Sbjct: 375 VFVSNVYASLGRWSSV-CQVRSLMKEKAPK 403


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/83 (43%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
 Frame = +1

Query: 10  RAGMLGNAHQFVKKMPIEPNAIIWRMLMNSCRVHNHFNLELNMVNALKILKTST-DPEDH 186
           RAGML  A+  +K MPI+PN ++WR L+++C+VH+  NLE+  + A  I K +  +P D+
Sbjct: 381 RAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHH--NLEIGEIAAENIFKLNQHNPGDY 438

Query: 187 VLISNIFAEAEKWDDVLCQRTVM 255
           ++++N++A A+KW DV   RT M
Sbjct: 439 LVLANMYARAKKWADVARIRTEM 461


>ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 636

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = +1

Query: 7   ARAGMLGNAHQFVKKMPIEPNAIIWRMLMNSCRVHNHFNLELNMVNALKILKTSTDPEDH 186
           +R G+L  AH  +K MP E N+++WR L+ +CRVH+H +L       L  ++   D  D+
Sbjct: 538 SRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRD-GDY 596

Query: 187 VLISNIFAEAEKWDDVLCQRTVML 258
           VL+SNI+AEA++W+DV   R+ M+
Sbjct: 597 VLLSNIYAEAQRWNDVERVRSEMI 620


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