BLASTX nr result

ID: Angelica23_contig00041858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041858
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    82   5e-14
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    81   1e-13
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_003622120.1| Pentatricopeptide repeat-containing protein ...    77   2e-12
gb|AAX95132.1| hypothetical protein [Oryza sativa Japonica Group...    74   1e-11

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
 Frame = -1

Query: 305 ILQIPLSYEARDDAWLWLEDEKGEYSVKSSYRLL-CKRYVSL---NNAIPDMKWLKLWSL 138
           IL IPL   +R+D   W  D +GEY+ +S Y  L C R  +    ++   +  W +LW +
Sbjct: 455 ILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKV 514

Query: 137 SAPPKIKNFIWRTLRNCIPTLCNLREKWVEVDLTCPVCRMAEES 6
           +APPKI NF WR  RNC+PT   L  + V+  + CP+CR   E+
Sbjct: 515 TAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELET 558


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
 Frame = -1

Query: 305  ILQIPLSYEARDDAWLWLEDEKGEYSVKSSYRLL-CKRYVSL---NNAIPDMKWLKLWSL 138
            IL IPL   +R+D   W  D +GEY+ +S Y  L C R  +    ++   +  W +LW +
Sbjct: 1185 ILYIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAALVASDVDSNFVWAQLWKV 1244

Query: 137  SAPPKIKNFIWRTLRNCIPTLCNLREKWVEVDLTCPVCRMAEES 6
            + PPKI NF WR  RNC+PT   L  + V+  + CP+CR   E+
Sbjct: 1245 TTPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSEPET 1288


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/101 (38%), Positives = 54/101 (53%)
 Frame = -1

Query: 305 ILQIPLSYEARDDAWLWLEDEKGEYSVKSSYRLLCKRYVSLNNAIPDMKWLKLWSLSAPP 126
           I  IPL+    +D+W WL D+KG Y VK+ YRLL         +     W K W L  P 
Sbjct: 383 IESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRPETSF----WNKFWKLKIPT 438

Query: 125 KIKNFIWRTLRNCIPTLCNLREKWVEVDLTCPVCRMAEESL 3
           K++N +W+   NCI T  NLR ++V++D  C  C    E+L
Sbjct: 439 KVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETL 479


>ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497135|gb|AES78338.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 894

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = -1

Query: 305 ILQIPLSYEARDDAWLWLEDEKGEYSVKSSYRLLCKRYVSLNNAIPDMKWLKLWSLSAPP 126
           I   PL      D  +W+ +  G YSVKS+Y+ +    V++ +   +  W  +WSL  PP
Sbjct: 207 IFNTPLFPSVAHDVPVWMFERDGAYSVKSAYKDILNHDVTVVHHRVEGNWNCIWSLKLPP 266

Query: 125 KIKNFIWRTLRNCIPTLCNLREKWVEVDLTCPVC 24
           K+KNF+WR  RNC+PT   L+ K V+    C +C
Sbjct: 267 KVKNFLWRACRNCLPTRIRLQSKGVQCTDRCAMC 300


>gb|AAX95132.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|62734252|gb|AAX96361.1| hypothetical protein
           LOC_Os11g08530 [Oryza sativa Japonica Group]
           gi|77549038|gb|ABA91835.1| expressed protein [Oryza
           sativa Japonica Group]
          Length = 371

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
 Frame = -1

Query: 305 ILQIPLSYEARDDAWLWLEDEKGEYSVKSSYRLL-------CKRYV----SLNNAIPDMK 159
           IL IP+     D A  W  D +G +SVKS+Y  L         R V    S+++ +  ++
Sbjct: 37  ILAIPVRLGFEDTA-AWHFDPRGRFSVKSAYHTLEDQRERLSLRQVGESSSVSSGVAKLE 95

Query: 158 WLKLWSLSAPPKIKNFIWRTLRNCIPTLCNLREKWVEVDLTCPVCRMAEE 9
           W ++WSL  PPK+K+F+WR   N +P   N+  + +EVD  CPVC   +E
Sbjct: 96  WGRIWSLHYPPKVKHFLWRLAHNSLPLRLNIDRRGLEVDTRCPVCLWMDE 145


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