BLASTX nr result

ID: Angelica23_contig00041817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041817
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32034.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...   214   6e-54
gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]            209   2e-52
ref|NP_176180.1| pentatricopeptide repeat-containing protein [Ar...   209   2e-52

>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  223 bits (568), Expect = 1e-56
 Identities = 105/161 (65%), Positives = 135/161 (83%)
 Frame = -2

Query: 483 LGRAGHIDEALDIIASMPMKPDAVIWRSILDACSKKSGGLELSEEVARQIFESEGVDCSG 304
           L RAG IDEALD++++MPM+PD VIWRS+LDAC K++ G+ELSEE+AR++ E+EG  CSG
Sbjct: 365 LARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSG 424

Query: 303 AYVLLSRVYAVANRWNEVGLIRNWMTDTGVKKEPGCSSIEMYGISHELFAGDTSHSSTKD 124
            YVLLSRVYA A+RWN+VG++R  MTD GV KEPGCSSIE+ G++HE FAGDTSH  T++
Sbjct: 425 VYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEE 484

Query: 123 IYELLDVIDKRLKAIGYVPDVSQAPMVDEQELVDGKRHSLR 1
           IY  LDVI++R++ +GY PD SQAPMVD  E +DGK++SLR
Sbjct: 485 IYSALDVIEERVERVGYSPDSSQAPMVD--ETIDGKQYSLR 523


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  223 bits (568), Expect = 1e-56
 Identities = 105/161 (65%), Positives = 135/161 (83%)
 Frame = -2

Query: 483 LGRAGHIDEALDIIASMPMKPDAVIWRSILDACSKKSGGLELSEEVARQIFESEGVDCSG 304
           L RAG IDEALD++++MPM+PD VIWRS+LDAC K++ G+ELSEE+AR++ E+EG  CSG
Sbjct: 379 LARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSG 438

Query: 303 AYVLLSRVYAVANRWNEVGLIRNWMTDTGVKKEPGCSSIEMYGISHELFAGDTSHSSTKD 124
            YVLLSRVYA A+RWN+VG++R  MTD GV KEPGCSSIE+ G++HE FAGDTSH  T++
Sbjct: 439 VYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEE 498

Query: 123 IYELLDVIDKRLKAIGYVPDVSQAPMVDEQELVDGKRHSLR 1
           IY  LDVI++R++ +GY PD SQAPMVD  E +DGK++SLR
Sbjct: 499 IYSALDVIEERVERVGYSPDSSQAPMVD--ETIDGKQYSLR 537


>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  214 bits (545), Expect = 6e-54
 Identities = 104/161 (64%), Positives = 129/161 (80%)
 Frame = -2

Query: 483 LGRAGHIDEALDIIASMPMKPDAVIWRSILDACSKKSGGLELSEEVARQIFESEGVDCSG 304
           L RAG IDEAL+++ASMPMKPD VIWRS+LD+C KK+  +ELSE +ARQI ESE  D SG
Sbjct: 379 LARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSG 438

Query: 303 AYVLLSRVYAVANRWNEVGLIRNWMTDTGVKKEPGCSSIEMYGISHELFAGDTSHSSTKD 124
            YVLLSRVYA A+RWN+VGL+R  MT+ G+ KEPGCS IE+ G++HE FAGDTSH  TK+
Sbjct: 439 VYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKE 498

Query: 123 IYELLDVIDKRLKAIGYVPDVSQAPMVDEQELVDGKRHSLR 1
           IY++L+V+++R+ + GY PD SQAPMVD  EL   KR SLR
Sbjct: 499 IYQVLNVVEERIDSTGYKPDYSQAPMVD--ELNTSKRDSLR 537


>gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
          Length = 695

 Score =  209 bits (532), Expect = 2e-52
 Identities = 106/168 (63%), Positives = 130/168 (77%), Gaps = 7/168 (4%)
 Frame = -2

Query: 483 LGRAGHIDEALDIIASMPMKPDAVIWRSILDACSKKSGGLELSEEVARQIF------ESE 322
           + RAG+I EA+D++ SMPMKPDAVIWRS+LDAC KK   +ELSEE+AR I       ES 
Sbjct: 460 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 519

Query: 321 GVDCSGAYVLLSRVYAVANRWNEVGLIRNWMTDTGVKKEPGCSSIEMYGISHELFAGDTS 142
             +CSGAYVLLSRVYA A+RWN+VG++R  M++ G++KEPGCSSIE+ GISHE FAGDTS
Sbjct: 520 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 579

Query: 141 HSSTKDIYELLDVIDKRLKAIGYVPDVSQAPMVDEQELVDG-KRHSLR 1
           H  TK IY+ L VID RL++IGY+PD SQAP+VD     DG K +SLR
Sbjct: 580 HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATN--DGSKEYSLR 625


>ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g59720, mitochondrial; Flags: Precursor
           gi|332195486|gb|AEE33607.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  209 bits (532), Expect = 2e-52
 Identities = 106/168 (63%), Positives = 130/168 (77%), Gaps = 7/168 (4%)
 Frame = -2

Query: 483 LGRAGHIDEALDIIASMPMKPDAVIWRSILDACSKKSGGLELSEEVARQIF------ESE 322
           + RAG+I EA+D++ SMPMKPDAVIWRS+LDAC KK   +ELSEE+AR I       ES 
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 462

Query: 321 GVDCSGAYVLLSRVYAVANRWNEVGLIRNWMTDTGVKKEPGCSSIEMYGISHELFAGDTS 142
             +CSGAYVLLSRVYA A+RWN+VG++R  M++ G++KEPGCSSIE+ GISHE FAGDTS
Sbjct: 463 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522

Query: 141 HSSTKDIYELLDVIDKRLKAIGYVPDVSQAPMVDEQELVDG-KRHSLR 1
           H  TK IY+ L VID RL++IGY+PD SQAP+VD     DG K +SLR
Sbjct: 523 HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATN--DGSKEYSLR 568


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