BLASTX nr result

ID: Angelica23_contig00041776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041776
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142454.1| PREDICTED: GABA transporter 1-like [Cucumis ...    49   2e-07
ref|XP_004173027.1| PREDICTED: LOW QUALITY PROTEIN: GABA transpo...    49   2e-07
emb|CBI40229.3| unnamed protein product [Vitis vinifera]               47   2e-07
ref|XP_002265793.1| PREDICTED: lysine histidine transporter 1 [V...    49   2e-07
ref|XP_002268610.1| PREDICTED: lysine histidine transporter 1-li...    47   2e-07

>ref|XP_004142454.1| PREDICTED: GABA transporter 1-like [Cucumis sativus]
          Length = 458

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = -3

Query: 212 EDDVGAAFVLESEGD*YHSRFHLTTAIVGPSISALPFALE--EWDGDLVS 69
           E D GA FVL+S G   H  +HLTT+IV P++ +LPFAL    W G ++S
Sbjct: 28  ELDAGALFVLKSRGSWLHCGYHLTTSIVAPALLSLPFALSMLGWVGGIIS 77



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 90  MGWGLGFFSLTVMGAVTFYSYN 25
           +GW  G  SL   G VTFYSYN
Sbjct: 69  LGWVGGIISLLFCGVVTFYSYN 90


>ref|XP_004173027.1| PREDICTED: LOW QUALITY PROTEIN: GABA transporter 1-like, partial
           [Cucumis sativus]
          Length = 332

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = -3

Query: 212 EDDVGAAFVLESEGD*YHSRFHLTTAIVGPSISALPFALE--EWDGDLVS 69
           E D GA FVL+S G   H  +HLTT+IV P++ +LPFAL    W G ++S
Sbjct: 28  ELDAGALFVLKSRGSWLHCGYHLTTSIVAPALLSLPFALSMLGWVGGIIS 77



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 90  MGWGLGFFSLTVMGAVTFYSYN 25
           +GW  G  SL   G VTFYSYN
Sbjct: 69  LGWVGGIISLLXCGVVTFYSYN 90


>emb|CBI40229.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score = 47.4 bits (111), Expect(2) = 2e-07
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 206 DVGAAFVLESEGD*YHSRFHLTTAIVGPSISALPFAL 96
           D GA FVL+S G  +H  +HLTT+IV P++ +LPFAL
Sbjct: 36  DAGALFVLKSRGSWWHCGYHLTTSIVAPALLSLPFAL 72



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 90  MGWGLGFFSLTVMGAVTFYSYN 25
           +GW  G F LT+   VTFYSYN
Sbjct: 75  LGWVAGVFCLTMAALVTFYSYN 96


>ref|XP_002265793.1| PREDICTED: lysine histidine transporter 1 [Vitis vinifera]
           gi|296090409|emb|CBI40228.3| unnamed protein product
           [Vitis vinifera]
          Length = 449

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -3

Query: 206 DVGAAFVLESEGD*YHSRFHLTTAIVGPSISALPFAL 96
           D GA FVL+S+G  +H  +HLTT+IV P+I +LPFAL
Sbjct: 20  DAGALFVLKSKGSWWHCAYHLTTSIVSPAILSLPFAL 56



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 90  MGWGLGFFSLTVMGAVTFYSYN 25
           +GW  G F LT+   VTFYSYN
Sbjct: 59  LGWVGGVFFLTMTALVTFYSYN 80


>ref|XP_002268610.1| PREDICTED: lysine histidine transporter 1-like [Vitis vinifera]
          Length = 442

 Score = 47.4 bits (111), Expect(2) = 2e-07
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 206 DVGAAFVLESEGD*YHSRFHLTTAIVGPSISALPFAL 96
           D GA FVL+S G  +H  +HLTT+IV P++ +LPFAL
Sbjct: 12  DAGALFVLKSRGSWWHCGYHLTTSIVAPALLSLPFAL 48



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 90  MGWGLGFFSLTVMGAVTFYSYN 25
           +GW  G F LT+   VTFYSYN
Sbjct: 51  LGWVAGVFCLTMAALVTFYSYN 72


Top