BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041561
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...   104   1e-20
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    99   5e-19
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    99   5e-19
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    96   3e-18
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          92   6e-17

>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/146 (34%), Positives = 79/146 (54%)
 Frame = -3

Query: 508 SNLVVSDLFMENMKSWDINKLNNLFCSEDVAAIVKTRIPQRYAVDRVAWTHSKNGKYTVK 329
           S L V++L   N K W+ + +N +F +     I KT +      D   W   K+G Y+++
Sbjct: 132 SELRVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLLPSVQQDIATWRFEKDGNYSIR 191

Query: 328 SGYFQWCQQHLIGNEVQQSRGWSVIWKLEVPHKTKVFLWRFCRNTLPVRNRLRGRGIQTP 149
           S Y      +   N+ + +  W+ IW L++P K K F+WR CRN LP R +L+ RG+Q P
Sbjct: 192 SAYCDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPTRVKLQSRGVQCP 251

Query: 148 IICSMCTGEIEHLRHLFFECQFARTC 71
           + C++  G  E   HLFF+C  + +C
Sbjct: 252 MDCAVYAGPYEDSSHLFFDCGKSISC 277


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
 Frame = -3

Query: 448 LNNLFCSEDVAAIVKTRIPQRYAVDRVAWTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSR 269
           +  +F  +  +AI+ T +  +   DR+ W    +GKY+V+S Y   C + LI     +  
Sbjct: 107 IGTVFSHDIASAIINTPLFSKVQHDRIIWKAENDGKYSVRSAY-TLCVEELIDTSFLRRP 165

Query: 268 G-WSVIWKLEVPHKTKVFLWRFCRNTLPVRNRLRGRGIQTPIICSMCTGEIEHLRHLFFE 92
           G WS IW+L+VP K K F+WR CR  LP RN+LR +G+Q P  C  C+   E ++HLF  
Sbjct: 166 GYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCV 225

Query: 91  CQF 83
           C F
Sbjct: 226 CTF 228


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
 Frame = -3

Query: 448 LNNLFCSEDVAAIVKTRIPQRYAVDRVAWTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSR 269
           +  +F  +  +AI+ T +  +   DR+ W    +GKY+V+S Y   C + LI     +  
Sbjct: 200 IGTVFSHDIASAIINTPLFSKVQHDRIIWKAENDGKYSVRSAY-TLCVEELIDTSFLRRP 258

Query: 268 G-WSVIWKLEVPHKTKVFLWRFCRNTLPVRNRLRGRGIQTPIICSMCTGEIEHLRHLFFE 92
           G WS IW+L+VP K K F+WR CR  LP RN+LR +G+Q P  C  C+   E ++HLF  
Sbjct: 259 GYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCV 318

Query: 91  CQF 83
           C F
Sbjct: 319 CTF 321


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
 Frame = -3

Query: 505  NLVVSDLFMENMKSWDINKLNNLFCSEDVAAIVKTRIPQRYAVDRVAWTHSKNGKYTVKS 326
            +L VS L     ++W++N L +LF  +DV  I+K R P  +  D   W HS NG Y+VK+
Sbjct: 957  DLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQR-PLFFKEDSFCWLHSHNGLYSVKT 1015

Query: 325  GYFQWCQQ--HLIGNEVQQSRG----WSVIWKLEVPHKTKVFLWRFCRNTLPVRNRLRGR 164
            GY    +Q  H +  E +        +  IW L    K ++FLW+     +PV +RLR R
Sbjct: 1016 GYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTR 1075

Query: 163  GIQTPIICSMCTGEIEHLRHLFFECQFAR 77
            GI++   C MC  E E + H+ FEC  AR
Sbjct: 1076 GIRSDDGCLMCDTENETINHILFECPLAR 1104


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
 Frame = -3

Query: 496 VSDLFMENMKSWDINKLNNLFCSEDVAAIVKTRIPQRYAVDRVAWTHSKNGKYTVKSGYF 317
           VSD F++N   W+ N L   F  EDV  I++ R+  R  +D V W   K+G+YTV+SGY+
Sbjct: 201 VSD-FIQN-GGWNENLLRLCFEEEDVTRILQIRLSLRRPLDMVRWKFIKDGEYTVRSGYY 258

Query: 316 -----QWCQQHLIGNEVQQSRGWSVIWKLEVPHKTKVFLWRFCRNTLPVRNRLRGRGIQT 152
                 W + +           W   W L  P + K  LWR   N L VR  L  RGIQ 
Sbjct: 259 IDFNCWWHENYATPLTHAGEERWKTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQV 318

Query: 151 PIICSMCTGEIEHLRHLFFECQF 83
             +C  C G  E   HLFF C +
Sbjct: 319 DEVCPCCAGPSETAAHLFFCCPY 341