BLASTX nr result

ID: Angelica23_contig00041493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041493
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ...    66   3e-09
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...    62   5e-08

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -1

Query: 213 KRVIRPVGRNIFGMVSRVVKTLSWTAARHVSFRKAVKKYGFTKSIDNFRIIVHVYAMTGM 34
           K V+ PV       V +V K+L+W  ARH+ F   +KKYGF++SID FR +V+V A+ GM
Sbjct: 87  KHVLSPV-------VVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGM 139

Query: 33  EREVWFLIRDI 1
             EV+ L+RDI
Sbjct: 140 HMEVYALLRDI 150


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -1

Query: 183 IFGMVSRVVKTLSWTAARHVSFRKAVKKYGFTKSIDNFRIIVHVYAMTGMEREVWFLIRD 4
           +F +VSRV K+LSW+ AR   F   V+ +GF+ SI  FRIIVH +A+ GM  EVW L+RD
Sbjct: 158 LFPLVSRVFKSLSWSVARKKKFGNWVECHGFSHSISCFRIIVHAFALAGMRLEVWALLRD 217

Query: 3   I 1
           I
Sbjct: 218 I 218


>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514181|gb|AES95804.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 892

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/58 (51%), Positives = 42/58 (72%)
 Frame = -1

Query: 174 MVSRVVKTLSWTAARHVSFRKAVKKYGFTKSIDNFRIIVHVYAMTGMEREVWFLIRDI 1
           +VS+V KTL+W  AR + F+  V+ +GF  SI++F II+H YA+ GM  EV+ LIRDI
Sbjct: 54  LVSKVFKTLNWGVAREIKFKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDI 111


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = -1

Query: 225 VVPSKRVIRPVGRNIFGMVSRVVKTLSWTAARHVSFRKAVKKYGFTKSIDNFRIIVHVYA 46
           +VP  +   P    +  +V  ++KTL+W  AR V F K+V  YGF  SI+ FR IVHV+A
Sbjct: 12  MVPRIKFKNPKRCELSRLVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFA 71

Query: 45  MTGMEREVWFLIRDI 1
           + G++RE  +L+ DI
Sbjct: 72  LAGLQREAQYLLTDI 86


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -1

Query: 198 PVGRNIFGMVSRVVKTLSWTAARHVSFRKAVKKYGFTKSIDNFRIIVHVYAMTGMEREVW 19
           P  R +F  V  V KTL+W  A H +F KAV  +GF+ SI  F+II+HV A  G++ EV 
Sbjct: 82  PRKRGLFPFVLTVFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQ 141

Query: 18  FLIRDI 1
             +RDI
Sbjct: 142 IFLRDI 147


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