BLASTX nr result

ID: Angelica23_contig00041330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041330
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...   228   7e-58
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...   213   3e-53
ref|XP_002534630.1| conserved hypothetical protein [Ricinus comm...   165   8e-39
tpg|DAA43465.1| TPA: putative RNA helicase family protein [Zea m...   127   2e-27

>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  240 bits (612), Expect = 2e-61
 Identities = 121/179 (67%), Positives = 143/179 (79%)
 Frame = +3

Query: 3    QLSQASSRNRILICAPTNSTCDVFMRNLWKEVGDSNIFRANAAFRELDGVPVDILPFCPY 182
            Q+ Q+SS+ RILICAP N TCD+ M++L  ++  S++FRANAAFRE+DGVP+DILP C Y
Sbjct: 492  QIYQSSSKLRILICAPINRTCDLLMQSLNNDIPKSDMFRANAAFREIDGVPIDILPSCAY 551

Query: 183  KEKDEVFSCPSLSQLRKFKVILSTFMSSFRLNNEGIERGHFTHIILVDASSVIEPEILVP 362
            K   E F+CPSL +LRKF+VILSTF+SSFRL NEGI  GHF+HI LVDASS  EPE +VP
Sbjct: 552  K--GECFTCPSLQELRKFRVILSTFVSSFRLRNEGIAAGHFSHIFLVDASSATEPEAMVP 609

Query: 363  LTNLANVSTNVVVTGAPRNQSSWVRSNIARKNGLRTSFFERLRDSKLYRDLNPESITQL 539
            L NLA+  T V+VTGAP N S WVRSNIARKNGL TS+FERLR SK YR L P+ ITQL
Sbjct: 610  LANLASEETAVIVTGAPGNHSGWVRSNIARKNGLMTSYFERLRHSKPYRSLLPKFITQL 668


>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  228 bits (582), Expect = 7e-58
 Identities = 114/179 (63%), Positives = 145/179 (81%)
 Frame = +3

Query: 3    QLSQASSRNRILICAPTNSTCDVFMRNLWKEVGDSNIFRANAAFRELDGVPVDILPFCPY 182
            Q+ Q+SS++RILICAP N TCDV M++L  ++ +S++FRANAAFRE+DGVP+DIL  C Y
Sbjct: 575  QIYQSSSKHRILICAPINRTCDVLMQSLKIDIPESDMFRANAAFREIDGVPIDILTSCVY 634

Query: 183  KEKDEVFSCPSLSQLRKFKVILSTFMSSFRLNNEGIERGHFTHIILVDASSVIEPEILVP 362
            K   + F+CPS+ +LRKF+VILSTF+SSFRL+NEGI  GHF+HI LV+ASS  EPE +V 
Sbjct: 635  KR--DCFTCPSIRELRKFRVILSTFVSSFRLHNEGIVAGHFSHIFLVNASSATEPEAMVA 692

Query: 363  LTNLANVSTNVVVTGAPRNQSSWVRSNIARKNGLRTSFFERLRDSKLYRDLNPESITQL 539
            L NLA+ +T V+VTGAP N S WVRSNIAR+NGL TS+FERLRDSK Y + +P+ I QL
Sbjct: 693  LANLASENTAVIVTGAPGNHSGWVRSNIARENGLMTSYFERLRDSKPYWNSHPKFIMQL 751


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
            gi|223529456|gb|EEF31415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 710

 Score =  213 bits (542), Expect = 3e-53
 Identities = 107/179 (59%), Positives = 136/179 (75%)
 Frame = +3

Query: 3    QLSQASSRNRILICAPTNSTCDVFMRNLWKEVGDSNIFRANAAFRELDGVPVDILPFCPY 182
            ++ ++S + RILICAP N TCDV MR+L KE+ +S +FRANAAFRE+DGVP DIL    Y
Sbjct: 527  RIYRSSQKYRILICAPINRTCDVLMRSL-KEIPESEMFRANAAFREIDGVPTDILASSLY 585

Query: 183  KEKDEVFSCPSLSQLRKFKVILSTFMSSFRLNNEGIERGHFTHIILVDASSVIEPEILVP 362
            K   + F+CP L +LRKFK+ILST++SSF+L+NEGI  GHF+HI +VDASS  EPE +V 
Sbjct: 586  K--GDCFACPKLQELRKFKIILSTYVSSFQLHNEGIAAGHFSHIFMVDASSATEPEAMVA 643

Query: 363  LTNLANVSTNVVVTGAPRNQSSWVRSNIARKNGLRTSFFERLRDSKLYRDLNPESITQL 539
            L N AN  T V+VTGAPRN S WVRS++ARKNGL  S+FERL +   Y++L+P  I QL
Sbjct: 644  LANFANEKTTVIVTGAPRNHSGWVRSDLARKNGLMKSYFERLCERTPYKNLDPNFIMQL 702


>ref|XP_002534630.1| conserved hypothetical protein [Ricinus communis]
           gi|223524876|gb|EEF27753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score =  165 bits (418), Expect = 8e-39
 Identities = 86/143 (60%), Positives = 107/143 (74%)
 Frame = +3

Query: 111 IFRANAAFRELDGVPVDILPFCPYKEKDEVFSCPSLSQLRKFKVILSTFMSSFRLNNEGI 290
           +FRANAAFRE+DGVP +IL    YK   E F+CP L +L++FKVILST+MSSFRL+NEGI
Sbjct: 1   MFRANAAFREIDGVPSEILASSLYK--GECFACPPLQELQEFKVILSTYMSSFRLHNEGI 58

Query: 291 ERGHFTHIILVDASSVIEPEILVPLTNLANVSTNVVVTGAPRNQSSWVRSNIARKNGLRT 470
             GHF+HI ++DASS  EPE +V L NLAN +T V+VTG+  N   WVRSNIARKNGL  
Sbjct: 59  PAGHFSHIFMLDASSAAEPEAMVALANLANENTAVIVTGSLGNHPGWVRSNIARKNGLII 118

Query: 471 SFFERLRDSKLYRDLNPESITQL 539
           S+F+RLR+   Y  L+   IT+L
Sbjct: 119 SYFKRLRERNPYDILDSNYITKL 141


>tpg|DAA43465.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 967

 Score =  127 bits (320), Expect = 2e-27
 Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 4/183 (2%)
 Frame = +3

Query: 3   QLSQASSRNRILICAPTNSTCDVFMRNLWKE---VGDSNIFRANAAFRELDGVPVDILPF 173
           QL     R  ILICA +N+  D  +  L +    +  S+IFR NA  R+ + V  D + F
Sbjct: 435 QLYTGKKRANILICAASNTAADHVLEKLLQASYLIRPSDIFRLNAQSRQYEDVSTDFIKF 494

Query: 174 CPYKEKDEVFSCPSLSQLRKFKVILSTFMSSFRLNNEGIERGHFTHIILVDASSVIEPEI 353
           C ++  D VF CP L  L ++++++ST+ SS++L  EGI +GHFTHI L +A    EPE 
Sbjct: 495 CFFQ--DRVFMCPPLQALVRYRIVISTYSSSYQLQAEGIRQGHFTHIFLDEAGQASEPEA 552

Query: 354 LVPLTNLANVSTNVVVTGAPRNQSSWVRSNIARKNGLRTSFFER-LRDSKLYRDLNPESI 530
           +VPL+ L    T VV+ G P+     V    A K+GL TS+ ER L D + Y   NP  +
Sbjct: 553 MVPLSGLCGRDTVVVLAGDPKQLGPVVYCKQAEKDGLGTSYLERLLTDFEPYGTRNPNYV 612

Query: 531 TQL 539
           T+L
Sbjct: 613 TKL 615


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