BLASTX nr result

ID: Angelica23_contig00041265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041265
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi...    81   8e-14
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]    75   7e-12
ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   5e-07

>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/109 (41%), Positives = 60/109 (55%)
 Frame = -2

Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150
           KHATQIHS+                  LYAKCG  +++L LF +  DD K+V+++TS+IT
Sbjct: 44  KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103

Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3
           QL++     K L FF  M  S V PN +TF AVL  C       +GEQ+
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQM 152


>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/109 (35%), Positives = 59/109 (54%)
 Frame = -2

Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150
           KHATQIHS+                  LYAKCG  + +L LF        +V+T+T++I 
Sbjct: 114 KHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLIN 173

Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3
           QLS+ N+  + L FF +M ++ + PN FTF A+L  C    ++  G+Q+
Sbjct: 174 QLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222


>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/109 (37%), Positives = 59/109 (54%)
 Frame = -2

Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150
           KHATQIH++                  LYAKCG  N++L LF  T   +K ++T+TS+IT
Sbjct: 159 KHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT 218

Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3
            LS  N   + L  F +M  S   PN+FTF ++L    A  +V +G+Q+
Sbjct: 219 HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267


>ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|222857318|gb|EEE94865.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/80 (38%), Positives = 47/80 (58%)
 Frame = -2

Query: 245 YAKCGHFNKSLTLFKNTQDDYKDVITYTSVITQLSKCNECCKGLIFFKKMMSSCVLPNEF 66
           YAKCG+ N SL LF+   D  K+ IT++++IT  S+  +  K L  F KM  +  +P+EF
Sbjct: 258 YAKCGNLNYSLMLFEMCSD--KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEF 315

Query: 65  TFFAVLRVCGAIGVVFNGEQ 6
           T   VL+ C  +  +  G+Q
Sbjct: 316 TLVGVLKACSDVAAIEEGKQ 335


>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = -2

Query: 317 QIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVITQLSK 138
           QIH++                  +Y++CG+   +  +F++ +D  ++VI++TS+IT  +K
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMED--RNVISWTSIITGFAK 555

Query: 137 CNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNG 12
                + L  F KM+   V PNE T+ AVL  C  +G+V  G
Sbjct: 556 HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEG 597


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