BLASTX nr result
ID: Angelica23_contig00041265
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00041265 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi... 81 8e-14 ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-12 emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 75 7e-12 ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 59 5e-07 >ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus] Length = 1866 Score = 81.3 bits (199), Expect = 8e-14 Identities = 45/109 (41%), Positives = 60/109 (55%) Frame = -2 Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150 KHATQIHS+ LYAKCG +++L LF + DD K+V+++TS+IT Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103 Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3 QL++ K L FF M S V PN +TF AVL C +GEQ+ Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQM 152 >ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Glycine max] Length = 771 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = -2 Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150 KHATQIHS+ LYAKCG + +L LF +V+T+T++I Sbjct: 114 KHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLIN 173 Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3 QLS+ N+ + L FF +M ++ + PN FTF A+L C ++ G+Q+ Sbjct: 174 QLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222 >emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] Length = 820 Score = 74.7 bits (182), Expect = 7e-12 Identities = 41/109 (37%), Positives = 59/109 (54%) Frame = -2 Query: 329 KHATQIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVIT 150 KHATQIH++ LYAKCG N++L LF T +K ++T+TS+IT Sbjct: 159 KHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT 218 Query: 149 QLSKCNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNGEQV 3 LS N + L F +M S PN+FTF ++L A +V +G+Q+ Sbjct: 219 HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267 >ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa] Length = 707 Score = 60.1 bits (144), Expect = 2e-07 Identities = 31/80 (38%), Positives = 47/80 (58%) Frame = -2 Query: 245 YAKCGHFNKSLTLFKNTQDDYKDVITYTSVITQLSKCNECCKGLIFFKKMMSSCVLPNEF 66 YAKCG+ N SL LF+ D K+ IT++++IT S+ + K L F KM + +P+EF Sbjct: 258 YAKCGNLNYSLMLFEMCSD--KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEF 315 Query: 65 TFFAVLRVCGAIGVVFNGEQ 6 T VL+ C + + G+Q Sbjct: 316 TLVGVLKACSDVAAIEEGKQ 335 >ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Cucumis sativus] Length = 849 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/102 (30%), Positives = 53/102 (51%) Frame = -2 Query: 317 QIHSKXXXXXXXXXXXXXXXXXXLYAKCGHFNKSLTLFKNTQDDYKDVITYTSVITQLSK 138 QIH++ +Y++CG+ + +F++ +D ++VI++TS+IT +K Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMED--RNVISWTSIITGFAK 555 Query: 137 CNECCKGLIFFKKMMSSCVLPNEFTFFAVLRVCGAIGVVFNG 12 + L F KM+ V PNE T+ AVL C +G+V G Sbjct: 556 HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEG 597