BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041213
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]            169   2e-40
gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Gr...   168   5e-40
ref|YP_003330957.1| photosystem II protein D2 [Parthenium argent...   167   6e-40
gb|ADD63025.1| photosystem II protein D2 [Potamophila parviflora]     166   2e-39
gb|AAF25668.1|AF209094_1 photosystem II D2 protein [Sinapis alba]     160   1e-37

>dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]
          Length = 359

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = +2

Query: 215 LNRRITMTIALGKVTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALEGWFTGTT 394
           +NRRITMTIALGKVTKDE DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFA+ GWFTGTT
Sbjct: 1   MNRRITMTIALGKVTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTT 60

Query: 395 FVTSWYTHGLTSSYLEGCNFLT 460
           FVTSWYTHGL SSYLEGCNFLT
Sbjct: 61  FVTSWYTHGLASSYLEGCNFLT 82


>gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Group]
           gi|42795542|gb|AAS46108.1| photosystem II protein D2
           [Oryza sativa Japonica Group] gi|42795606|gb|AAS46171.1|
           photosystem II protein D2 [Oryza sativa Japonica Group]
           gi|290790561|gb|ADD62821.1| photosystem II protein D2
           [Oryza sativa Japonica Group]
           gi|290790630|gb|ADD62889.1| photosystem II protein D2
           [Oryza meridionalis] gi|290790699|gb|ADD62957.1|
           photosystem II protein D2 [Oryza australiensis]
           gi|290790836|gb|ADD63092.1| photosystem II protein D2
           [Microlaena stipoides]
          Length = 359

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +2

Query: 215 LNRRITMTIALGKVTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALEGWFTGTT 394
           +NRRITMTIALG+VTK+E DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAL GWFTGTT
Sbjct: 1   MNRRITMTIALGRVTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT 60

Query: 395 FVTSWYTHGLTSSYLEGCNFLT 460
           FVTSWYTHGL SSYLEGCNFLT
Sbjct: 61  FVTSWYTHGLASSYLEGCNFLT 82


>ref|YP_003330957.1| photosystem II protein D2 [Parthenium argentatum]
           gi|269924833|gb|ACZ52706.1| photosystem II protein D2
           [Parthenium argentatum]
          Length = 199

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/82 (92%), Positives = 78/82 (95%)
 Frame = +2

Query: 215 LNRRITMTIALGKVTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALEGWFTGTT 394
           +NRRITMTIALGK TKDE DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFA+ GWFTGTT
Sbjct: 1   MNRRITMTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTT 60

Query: 395 FVTSWYTHGLTSSYLEGCNFLT 460
           FVTSWYTHGL SSYLEGCNFLT
Sbjct: 61  FVTSWYTHGLASSYLEGCNFLT 82


>gb|ADD63025.1| photosystem II protein D2 [Potamophila parviflora]
          Length = 359

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/82 (91%), Positives = 78/82 (95%)
 Frame = +2

Query: 215 LNRRITMTIALGKVTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALEGWFTGTT 394
           +NRRITMTIALG+V K+E DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAL GWFTGTT
Sbjct: 1   MNRRITMTIALGRVAKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT 60

Query: 395 FVTSWYTHGLTSSYLEGCNFLT 460
           FVTSWYTHGL SSYLEGCNFLT
Sbjct: 61  FVTSWYTHGLASSYLEGCNFLT 82


>gb|AAF25668.1|AF209094_1 photosystem II D2 protein [Sinapis alba]
          Length = 78

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +2

Query: 233 MTIALGKVTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALEGWFTGTTFVTSWY 412
           MTIALGK TKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAL GWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 413 THGLTSSYLEGCNFLT 460
           THGL SSYLEGCNFLT
Sbjct: 61  THGLASSYLEGCNFLT 76