BLASTX nr result

ID: Angelica23_contig00041204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041204
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]    92   4e-17
ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CBI15198.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002514728.1| pentatricopeptide repeat-containing protein,...    78   8e-13
ref|NP_200948.1| pentatricopeptide repeat-containing protein [Ar...    63   2e-08

>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/80 (58%), Positives = 63/80 (78%)
 Frame = -1

Query: 240 ELHSAVIHVLNHAKMYLQARCLMKCLLELVLKTRGSKRACSAVFEVLSEVKSEKWDFNVF 61
           +L+SA+IHVL  AK+Y +ARCLM+ L++ + K+R S R C +VF VLS ++S K+  NVF
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRS-RICCSVFNVLSRLESSKFTPNVF 129

Query: 60  GVLIIALSEMGLVDEARWVF 1
           GVLIIA SEMGLV+EA WV+
Sbjct: 130 GVLIIAFSEMGLVEEALWVY 149


>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/80 (57%), Positives = 62/80 (77%)
 Frame = -1

Query: 240 ELHSAVIHVLNHAKMYLQARCLMKCLLELVLKTRGSKRACSAVFEVLSEVKSEKWDFNVF 61
           +L+SA+IHVL  AK+Y +ARCLM+ L++ +  +R S R C +VF VLS ++S K+  NVF
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRS-RICCSVFNVLSRLESSKFTPNVF 129

Query: 60  GVLIIALSEMGLVDEARWVF 1
           GVLIIA SEMGLV+EA WV+
Sbjct: 130 GVLIIAFSEMGLVEEALWVY 149


>emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/80 (57%), Positives = 62/80 (77%)
 Frame = -1

Query: 240 ELHSAVIHVLNHAKMYLQARCLMKCLLELVLKTRGSKRACSAVFEVLSEVKSEKWDFNVF 61
           +L+SA+IHVL  AK+Y +ARCLM+ L++ +  +R S R C +VF VLS ++S K+  NVF
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRS-RICCSVFNVLSRLESSKFTPNVF 129

Query: 60  GVLIIALSEMGLVDEARWVF 1
           GVLIIA SEMGLV+EA WV+
Sbjct: 130 GVLIIAFSEMGLVEEALWVY 149


>ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546332|gb|EEF47834.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = -1

Query: 243 LELHSAVIHVLNHAKMYLQARCLMKCLLELVLKTRGSKRACSAVFEVLSEVKSEKWDFNV 64
           L L+SAVIH L  AK+Y  ARCL K L++ +L++   +R  S VF  LS+++  K++ +V
Sbjct: 62  LHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSV 121

Query: 63  FGVLIIALSEMGLVDEARWVF 1
           FGVLIIA SE+GLVDEA  V+
Sbjct: 122 FGVLIIAFSEVGLVDEALRVY 142


>ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g61400 gi|9757861|dbj|BAB08495.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010079|gb|AED97462.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = -1

Query: 243 LELHSAVIHVLNHAKMYLQARCLMKCLLELVLKTRGSKRACSAVFEVLSEVKSEKWDFNV 64
           L+  SAVIHVL  A  Y  ARCL+K L+E + +          +F  L +++S K+   V
Sbjct: 75  LQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGV 134

Query: 63  FGVLIIALSEMGLVDEARWV 4
           F +LI+   EMGL +EA WV
Sbjct: 135 FSLLIMEFLEMGLFEEALWV 154


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