BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041155
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    56   1e-08
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         53   3e-08
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...    53   4e-08
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...    53   4e-08
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    52   5e-08

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 955

 Score = 55.8 bits (133), Expect(2) = 1e-08
 Identities = 26/88 (29%), Positives = 45/88 (51%)
 Frame = -3

Query: 319 TPTSQLEMVSSCCQISEVVPRWLEQLEASYGGDMELQDLIARVVIDKSGPQEYYLRQGLL 140
           +P ++ E+   C  I+ VVP W+  ++ SY  D++   L++ +        EY    G++
Sbjct: 461 SPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIM 520

Query: 139 MYRGKWVVGATGELRKQVFDELHCKGIG 56
            Y+G+  VG TGE+R Q+    H    G
Sbjct: 521 KYKGRIYVGETGEIRGQLIQAYHSSTFG 548



 Score = 28.1 bits (61), Expect(2) = 1e-08
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 56  GHSGQRATVKRILEYFYW 3
           GH G RAT +RI + FYW
Sbjct: 549 GHCGIRATYQRIKKLFYW 566


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 52.8 bits (125), Expect(2) = 3e-08
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
 Frame = -3

Query: 367  LLQTMKFTWK-----GQEILLTPT-SQLEMVSSCCQISEVVPRWLEQLEASYGGDMELQD 206
            LL+ M++ +      G+E L+    S++     C  I+ V+P W+  ++ SY GD++   
Sbjct: 1070 LLKLMEYDYSIEYKAGKENLVADALSRIPPAEQCQAITTVIPEWVRDIQRSYEGDVQAHK 1129

Query: 205  LIARVVIDKSGPQEYYLRQGLLMYRGKWVVGATGELRKQVFDELHCKGIG 56
            +++ +  +      Y    GLL Y+G+  VG   E+R+++    H    G
Sbjct: 1130 ILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFG 1179



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -2

Query: 56   GHSGQRATVKRILEYFYW 3
            GHSG RAT  RI   FYW
Sbjct: 1180 GHSGMRATYHRIKSLFYW 1197


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score = 53.1 bits (126), Expect(2) = 4e-08
 Identities = 23/87 (26%), Positives = 44/87 (50%)
 Frame = -3

Query: 316  PTSQLEMVSSCCQISEVVPRWLEQLEASYGGDMELQDLIARVVIDKSGPQEYYLRQGLLM 137
            P  QL+    C  I+ V+P+W+  ++ SY GD++   +++ +  +    Q Y    G+L 
Sbjct: 1053 PQDQLQ-TEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSFENGILR 1111

Query: 136  YRGKWVVGATGELRKQVFDELHCKGIG 56
            ++G+  VG    +R  +  + HC   G
Sbjct: 1112 FKGRIYVGEETSIRTNLIRDYHCSAFG 1138



 Score = 28.9 bits (63), Expect(2) = 4e-08
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -2

Query: 56   GHSGQRATVKRILEYFYW 3
            GHSG RAT  RI   FYW
Sbjct: 1139 GHSGMRATHHRIKALFYW 1156


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score = 53.1 bits (126), Expect(2) = 4e-08
 Identities = 23/87 (26%), Positives = 44/87 (50%)
 Frame = -3

Query: 316  PTSQLEMVSSCCQISEVVPRWLEQLEASYGGDMELQDLIARVVIDKSGPQEYYLRQGLLM 137
            P  QL+    C  I+ V+P+W+  ++ SY GD++   +++ +  +    Q Y    G+L 
Sbjct: 951  PQDQLQ-TEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSFENGILR 1009

Query: 136  YRGKWVVGATGELRKQVFDELHCKGIG 56
            ++G+  VG    +R  +  + HC   G
Sbjct: 1010 FKGRIYVGEETSIRTNLIRDYHCSAFG 1036



 Score = 28.9 bits (63), Expect(2) = 4e-08
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -2

Query: 56   GHSGQRATVKRILEYFYW 3
            GHSG RAT  RI   FYW
Sbjct: 1037 GHSGMRATHHRIKALFYW 1054


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 52.0 bits (123), Expect(2) = 5e-08
 Identities = 24/77 (31%), Positives = 40/77 (51%)
 Frame = -3

Query: 286  CCQISEVVPRWLEQLEASYGGDMELQDLIARVVIDKSGPQEYYLRQGLLMYRGKWVVGAT 107
            C  I+ VVP W++ ++ SY  D+    +++ +  D    + Y L  GLL Y+G+  VG T
Sbjct: 1128 CLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGET 1187

Query: 106  GELRKQVFDELHCKGIG 56
             E+R  + +  H    G
Sbjct: 1188 TEIRMLLLEAYHASYFG 1204



 Score = 29.6 bits (65), Expect(2) = 5e-08
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 56   GHSGQRATVKRILEYFYW 3
            GHSG RAT  RI + FYW
Sbjct: 1205 GHSGIRATYHRIKQLFYW 1222