BLASTX nr result

ID: Angelica23_contig00041120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041120
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,...    70   1e-10
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]    69   3e-10
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10

>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/89 (43%), Positives = 57/89 (64%)
 Frame = +1

Query: 55  LFSNVGKDKYCQCICKPPSGKYNQVGFVYTSRLHDVNKNITLLISNSRLDDARALFDTTT 234
           +F  + + +YC     P + KYN      +S L+  NK I+ LI + RL +ARALFD+  
Sbjct: 13  IFHQLPRIRYCHASASP-THKYNN-----SSPLNRSNKKISNLIRSGRLSEARALFDSMK 66

Query: 235 DKNNVTWNSMLSGYVQGREIVQARKLFDK 321
            ++ VTWNSM++GYV  REI +AR+LFD+
Sbjct: 67  HRDTVTWNSMITGYVHRREIARARQLFDE 95


>ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503052|gb|AES84255.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 592

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 43/57 (75%)
 Frame = +1

Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321
           L+ +NK I+ LI   RL  AR LFD+T  +N VTWNSM++GYVQ REI +AR+LFD+
Sbjct: 38  LYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDE 94


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = +1

Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321
           L+  NK I+ LI N R+++ARALFD    +N VTWNSM++GYV+ RE+ +ARKLFD+
Sbjct: 67  LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDE 123


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = +1

Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321
           L+  NK I+ LI N R+++ARALFD    +N VTWNSM++GYV+ RE+ +ARKLFD+
Sbjct: 67  LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDE 123


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 649

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/79 (44%), Positives = 51/79 (64%)
 Frame = +1

Query: 85  CQCICKPPSGKYNQVGFVYTSRLHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSM 264
           C  +   P+  YN      +S L+  NK ++ LI + R+ +AR LFD+   ++ VTWNSM
Sbjct: 22  CCHVSASPTHNYN------SSPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSM 75

Query: 265 LSGYVQGREIVQARKLFDK 321
           +SGYVQ REI +AR+LFD+
Sbjct: 76  ISGYVQRREIARARQLFDE 94


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