BLASTX nr result
ID: Angelica23_contig00041120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00041120 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi... 73 2e-11 ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,... 70 1e-10 ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-10 emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera] 69 3e-10 ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi... 69 4e-10 >ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like [Glycine max] Length = 647 Score = 73.2 bits (178), Expect = 2e-11 Identities = 39/89 (43%), Positives = 57/89 (64%) Frame = +1 Query: 55 LFSNVGKDKYCQCICKPPSGKYNQVGFVYTSRLHDVNKNITLLISNSRLDDARALFDTTT 234 +F + + +YC P + KYN +S L+ NK I+ LI + RL +ARALFD+ Sbjct: 13 IFHQLPRIRYCHASASP-THKYNN-----SSPLNRSNKKISNLIRSGRLSEARALFDSMK 66 Query: 235 DKNNVTWNSMLSGYVQGREIVQARKLFDK 321 ++ VTWNSM++GYV REI +AR+LFD+ Sbjct: 67 HRDTVTWNSMITGYVHRREIARARQLFDE 95 >ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] gi|355503052|gb|AES84255.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] Length = 592 Score = 70.5 bits (171), Expect = 1e-10 Identities = 33/57 (57%), Positives = 43/57 (75%) Frame = +1 Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321 L+ +NK I+ LI RL AR LFD+T +N VTWNSM++GYVQ REI +AR+LFD+ Sbjct: 38 LYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDE 94 >ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Vitis vinifera] Length = 681 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/57 (56%), Positives = 44/57 (77%) Frame = +1 Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321 L+ NK I+ LI N R+++ARALFD +N VTWNSM++GYV+ RE+ +ARKLFD+ Sbjct: 67 LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDE 123 >emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera] Length = 761 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/57 (56%), Positives = 44/57 (77%) Frame = +1 Query: 151 LHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSMLSGYVQGREIVQARKLFDK 321 L+ NK I+ LI N R+++ARALFD +N VTWNSM++GYV+ RE+ +ARKLFD+ Sbjct: 67 LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDE 123 >ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like [Glycine max] Length = 649 Score = 68.9 bits (167), Expect = 4e-10 Identities = 35/79 (44%), Positives = 51/79 (64%) Frame = +1 Query: 85 CQCICKPPSGKYNQVGFVYTSRLHDVNKNITLLISNSRLDDARALFDTTTDKNNVTWNSM 264 C + P+ YN +S L+ NK ++ LI + R+ +AR LFD+ ++ VTWNSM Sbjct: 22 CCHVSASPTHNYN------SSPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSM 75 Query: 265 LSGYVQGREIVQARKLFDK 321 +SGYVQ REI +AR+LFD+ Sbjct: 76 ISGYVQRREIARARQLFDE 94