BLASTX nr result

ID: Angelica23_contig00041103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041103
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]              129   4e-28
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   129   4e-28
ref|XP_002303899.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...   105   9e-21

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = +2

Query: 2    CEPNAATYRTMVDGFCSVEDFEGGLKVLNAMLMSNHCPRLETFCCLIVGLTSSGKLDDAC 181
            CEPNAATYR MVDGFC VEDFEGGLKVL+AMLM  HCPRLE+FC L+VGL  +GK+D AC
Sbjct: 760  CEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGAC 819

Query: 182  YILEEMDNRKLRVHSKLWNPWFK 250
            ++LEEM+ RK+R H + W    K
Sbjct: 820  FVLEEMEKRKMRFHLEAWEALVK 842


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = +2

Query: 2   CEPNAATYRTMVDGFCSVEDFEGGLKVLNAMLMSNHCPRLETFCCLIVGLTSSGKLDDAC 181
           CEPNAATYR MVDGFC VEDFEGGLKVL+AMLM  HCPRLE+FC L+VGL  +GK+D AC
Sbjct: 398 CEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGAC 457

Query: 182 YILEEMDNRKLRVHSKLWNPWFK 250
           ++LEEM+ RK+R H + W    K
Sbjct: 458 FVLEEMEKRKMRFHLEAWEALVK 480


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = +2

Query: 2   CEPNAATYRTMVDGFCSVEDFEGGLKVLNAMLMSNHCPRLETFCCLIVGLTSSGKLDDAC 181
           CEPNAATYR MVDGFC VEDFEGGLKVL+AMLM  HCPRLE+FC L+VGL  +GK+D AC
Sbjct: 689 CEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGAC 748

Query: 182 YILEEMDNRKLRVHSKLWNPWFK 250
           ++LEEM+ RK+R H + W    K
Sbjct: 749 FVLEEMEKRKMRFHLEAWEALVK 771


>ref|XP_002303899.1| predicted protein [Populus trichocarpa] gi|222841331|gb|EEE78878.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/78 (64%), Positives = 59/78 (75%)
 Frame = +2

Query: 2   CEPNAATYRTMVDGFCSVEDFEGGLKVLNAMLMSNHCPRLETFCCLIVGLTSSGKLDDAC 181
           CE NAATYR +VDGFC V DFEGGLKVLNAML S H PR+ETF  L+VGL  SG LD AC
Sbjct: 339 CEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGAC 398

Query: 182 YILEEMDNRKLRVHSKLW 235
           ++LEEM+ R++   +  W
Sbjct: 399 FVLEEMEKRQMMFCADDW 416


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score =  105 bits (261), Expect = 9e-21
 Identities = 47/83 (56%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   CEPNAATYRTMVDGFCSVEDFEGGLKVLNAMLMSNHCPRLETFCCLIVGLTSSGKLDDAC 181
           C PNAATYR +VDG C + DFE  L VLNAML S HCPR ETF C++VGL  SG +D +C
Sbjct: 346 CVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSC 405

Query: 182 YILEEMDNRKLRVHSKLWNPWFK 250
           ++LEEM+ RKL    + W    K
Sbjct: 406 FVLEEMEKRKLEFDLESWETIIK 428


Top