BLASTX nr result

ID: Angelica23_contig00041062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041062
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524230.1| PREDICTED: translocase of chloroplast 159, c...    93   2e-17
ref|XP_002531885.1| protein translocase, putative [Ricinus commu...    93   2e-17
ref|XP_003594521.1| Chloroplast protein import component Toc159-...    91   1e-16
ref|XP_002314386.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002332266.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>ref|XP_003524230.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Glycine max]
          Length = 1240

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = +3

Query: 6    GMVRSQQDIAFGANIDIRRREHDYPIGQIQSLLCLSMVCLREELRLMLNSFAQFSIGRNS 185
            G+V+SQ D A+GAN+++R RE D+PIGQ QS L LS+V  R +L L  N  +QFS+GR  
Sbjct: 1126 GVVKSQTDSAYGANVEVRLREADFPIGQDQSSLSLSLVKWRGDLALGANLQSQFSVGRGY 1185

Query: 186  KVNVTASVNQNLRGQISVRTSSSES-SFMLASILFAAISICRKLFCGA 326
            KV V A +N  L GQISVRTSSS+     L +IL  A +I +  + GA
Sbjct: 1186 KVAVRAGLNNKLSGQISVRTSSSDQLQIALIAILPIAKAIYKNFWPGA 1233


>ref|XP_002531885.1| protein translocase, putative [Ricinus communis]
            gi|223528493|gb|EEF30522.1| protein translocase, putative
            [Ricinus communis]
          Length = 1051

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6    GMVRSQQDIAFGANIDIRRREHDYPIGQIQSLLCLSMVCLREELRLMLNSFAQFSIGRNS 185
            G V SQ D A+GAN+++R RE DYPIGQ QS L LS+V  R +L L  N  +QFSIGRNS
Sbjct: 938  GTVLSQGDSAYGANLEVRLREADYPIGQDQSSLGLSLVKWRGDLALGANLQSQFSIGRNS 997

Query: 186  KVNVTASVNQNLRGQISVRTSSSES-SFMLASILFAAISICRKL 314
            K+ V A +N  + GQ++VRTSSS+     L  +L  A+SI + L
Sbjct: 998  KIAVRAGLNNKMSGQLTVRTSSSDQLQIALVGLLPIAMSIYKSL 1041


>ref|XP_003594521.1| Chloroplast protein import component Toc159-like protein [Medicago
            truncatula] gi|355483569|gb|AES64772.1| Chloroplast
            protein import component Toc159-like protein [Medicago
            truncatula]
          Length = 854

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/105 (50%), Positives = 69/105 (65%)
 Frame = +3

Query: 3    AGMVRSQQDIAFGANIDIRRREHDYPIGQIQSLLCLSMVCLREELRLMLNSFAQFSIGRN 182
            AG++RSQ D A+G N+++R +E D+PIGQ QS L LS+V  R EL L  N  +QFSIGR+
Sbjct: 737  AGLMRSQGDSAYGTNVEVRFKEADFPIGQDQSSLSLSLVKWRGELALGANLQSQFSIGRS 796

Query: 183  SKVNVTASVNQNLRGQISVRTSSSESSFMLASILFAAISICRKLF 317
             K+ V A +N    GQISVRTSSSE    L   L A + I R ++
Sbjct: 797  YKMAVRAGLNNKRSGQISVRTSSSE---QLQIALVAVLPIVRAIY 838


>ref|XP_002314386.1| predicted protein [Populus trichocarpa] gi|222863426|gb|EEF00557.1|
            predicted protein [Populus trichocarpa]
          Length = 887

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/109 (45%), Positives = 71/109 (65%)
 Frame = +3

Query: 3    AGMVRSQQDIAFGANIDIRRREHDYPIGQIQSLLCLSMVCLREELRLMLNSFAQFSIGRN 182
            AG VRS  D A+GAN ++R +  D+PI Q QS L LS++  R +L LM +  +QFSIGRN
Sbjct: 770  AGTVRSGNDTAYGANFEVRLKSKDFPIEQDQSTLGLSLMKWRGDLGLMAHLQSQFSIGRN 829

Query: 183  SKVNVTASVNQNLRGQISVRTSSSESSFMLASILFAAISICRKLFCGAD 329
            SK+ V   +N    GQIS++TSSSE    L  I+  A+SI + ++ G++
Sbjct: 830  SKMAVHVGMNNKRSGQISIKTSSSELQAALIGIVPIAVSILQSIYPGSN 878


>ref|XP_002332266.1| predicted protein [Populus trichocarpa] gi|222832031|gb|EEE70508.1|
            predicted protein [Populus trichocarpa]
          Length = 839

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/109 (44%), Positives = 70/109 (64%)
 Frame = +3

Query: 3    AGMVRSQQDIAFGANIDIRRREHDYPIGQIQSLLCLSMVCLREELRLMLNSFAQFSIGRN 182
            AG VRS  D A+GAN+++  +  D+PI Q QS L LS++  R +L LM +   QFS+GRN
Sbjct: 722  AGTVRSGGDTAYGANLEVHLKSKDFPIEQDQSTLGLSLMKWRGDLGLMAHLQCQFSVGRN 781

Query: 183  SKVNVTASVNQNLRGQISVRTSSSESSFMLASILFAAISICRKLFCGAD 329
            SK+ +   +N  L GQIS++T SSE    L  I+  A+SI R ++ G++
Sbjct: 782  SKMAIRVGMNNKLSGQISIKTKSSELQAALIVIVPVAVSILRSIYPGSN 830


Top