BLASTX nr result

ID: Angelica23_contig00041015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00041015
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
emb|CBI15077.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25

>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/102 (77%), Positives = 86/102 (84%)
 Frame = +2

Query: 2   GCSHAGLVEEGSSIFFNMESLWGIVPKLEHYGCYVDLLGRAGYLERAFRAVKNMPMEPDI 181
           GCSH+GLVEEGSSI  NMESLWGI PK+EHYGCY+DLLGRAGYLERA   VK MPMEPDI
Sbjct: 421 GCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDI 480

Query: 182 VIWRALLSACRVHRDVKLGELIINHIEQLDYSRHDGGAVLLS 307
           VIWRALLSA R+H +V LGE II+HI QL  S H+GG VLLS
Sbjct: 481 VIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLS 522


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/102 (73%), Positives = 83/102 (81%)
 Frame = +2

Query: 2   GCSHAGLVEEGSSIFFNMESLWGIVPKLEHYGCYVDLLGRAGYLERAFRAVKNMPMEPDI 181
           GCSH+GLVEEG SIF +M  LWGIVPKLEHYGC +DLLGRAG LE AF A+K+MPMEPD+
Sbjct: 400 GCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDV 459

Query: 182 VIWRALLSACRVHRDVKLGELIINHIEQLDYSRHDGGAVLLS 307
           V WRALLSACR+H DV LGE IINHI +L    H GG VLLS
Sbjct: 460 VAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLS 501


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/105 (70%), Positives = 83/105 (79%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   GCSHAGLVEE---GSSIFFNMESLWGIVPKLEHYGCYVDLLGRAGYLERAFRAVKNMPME 172
           G S+ GL ++   GSSI  NMESLWGI PK+EHYGCY+DLLGRAGYLERA   VK MPME
Sbjct: 538 GLSYHGLGKDALRGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPME 597

Query: 173 PDIVIWRALLSACRVHRDVKLGELIINHIEQLDYSRHDGGAVLLS 307
           PDIVIWRALLSA R+H +V LGE II+HI QL  S H+GG VLLS
Sbjct: 598 PDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLS 642


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/97 (54%), Positives = 74/97 (76%)
 Frame = +2

Query: 5   CSHAGLVEEGSSIFFNMESLWGIVPKLEHYGCYVDLLGRAGYLERAFRAVKNMPMEPDIV 184
           CSHAGLVEEG S F +M  + G+ P++EHYGC VDLLGRAG+LE A   ++NMP+EPD V
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440

Query: 185 IWRALLSACRVHRDVKLGELIINHIEQLDYSRHDGGA 295
           IW+ALL AC++H+++K+GE +   + +L  + HD G+
Sbjct: 441 IWKALLGACKMHKNLKMGERVAETLMEL--APHDSGS 475


>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/97 (54%), Positives = 74/97 (76%)
 Frame = +2

Query: 5   CSHAGLVEEGSSIFFNMESLWGIVPKLEHYGCYVDLLGRAGYLERAFRAVKNMPMEPDIV 184
           CSHAGLVEEG S F +M  + G+ P++EHYGC VDLLGRAG+LE A   ++NMP+EPD V
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440

Query: 185 IWRALLSACRVHRDVKLGELIINHIEQLDYSRHDGGA 295
           IW+ALL AC++H+++K+GE +   + +L  + HD G+
Sbjct: 441 IWKALLGACKMHKNLKMGERVAETLMEL--APHDSGS 475


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