BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040967
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93119.1|TOP1_DAUCA RecName: Full=DNA topoisomerase 1; AltNam...    92   4e-17
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]                61   8e-08
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]              57   2e-06
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...    56   3e-06
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]        56   3e-06

>sp|P93119.1|TOP1_DAUCA RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
           I gi|1800221|gb|AAB41401.1| topoisomerase I [Daucus
           carota]
          Length = 790

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/88 (64%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   DEMVLSMNFAPKLNAGTSTGKSSDSDESKHLALEPKKEPLSSLNKRPLIQTKNSDPSSSK 180
           DEM+LS     +LNAG S  +SSDSDESK LA E  ++P SSLNKRPLIQ KNSDPS SK
Sbjct: 82  DEMLLSSEL--QLNAGASNAESSDSDESKPLASE-LEDPSSSLNKRPLIQPKNSDPSPSK 138

Query: 181 KAKLSEGSA-SSRKRKQPKAEEAHDDDD 261
           KAKLSE SA ++RK K  + EEA  DDD
Sbjct: 139 KAKLSEPSAPTNRKLKTAEQEEAAADDD 166


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
 Frame = +1

Query: 1   DEMVLSMNFAPKLNAGTSTGKSSDSDESKHL--------ALEPKKEPLSSLNKRPLIQTK 156
           DE+ LS  F  K NAGTST KS +SD++K L        ++    +    +NKRPL + K
Sbjct: 190 DEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGSKSSIKVNKRPLGEVK 249

Query: 157 NSDPSSSKKAKLSEGSAS-SRKRKQPKAEEAHDDDDD 264
           +S  SS KK KLS+ S   + K+   KAE   DD DD
Sbjct: 250 SSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDD 286


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 42/100 (42%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
 Frame = +1

Query: 1   DEMVLSMNFAPKLNAGTSTGKSSDSDESKHLALE-----------PKKEPLSSLNKRPLI 147
           DE  LS  F  K + G ST KS DSDE K LA +           P  +  S LNKR   
Sbjct: 195 DEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKSASLLNKRAPG 254

Query: 148 QTKNSDPSSSKKAKLSEGSAS-SRKRKQPKAEEAHDDDDD 264
           + K+ + SS KKAKLS    S S K+   K E   +DDDD
Sbjct: 255 EVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDD 294


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/100 (41%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
 Frame = +1

Query: 1   DEMVLSMNFAPKLNAGTSTGKSSDSDESKHLALE-----------PKKEPLSSLNKRPLI 147
           DE  LS  F  K + G ST KS DSDE K LA +           P  +  S  NKRP  
Sbjct: 195 DEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPG 254

Query: 148 QTKNSDPSSSKKAKLSEGSAS-SRKRKQPKAEEAHDDDDD 264
           + K+ + SS KK KLS    S S K+   K E   +DDDD
Sbjct: 255 EVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDD 294


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/100 (41%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
 Frame = +1

Query: 1   DEMVLSMNFAPKLNAGTSTGKSSDSDESKHLALE-----------PKKEPLSSLNKRPLI 147
           DE  LS  F  K + G ST KS DSDE K LA +           P  +  S  NKRP  
Sbjct: 194 DEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPG 253

Query: 148 QTKNSDPSSSKKAKLSEGSAS-SRKRKQPKAEEAHDDDDD 264
           + K+ + SS KK KLS    S S K+   K E   +DDDD
Sbjct: 254 EAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDD 293