BLASTX nr result

ID: Angelica23_contig00040943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040943
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-17
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...    93   3e-17
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ...    93   3e-17
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...    90   2e-16

>ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|222835164|gb|EEE73599.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 87.8 bits (216), Expect(2) = 1e-17
 Identities = 43/59 (72%), Positives = 47/59 (79%)
 Frame = +3

Query: 18  ASWAEDRVRQLLKKYGDIEIIKFFRNMPSAM*KDFKFITFDTHDATI*CAKSINNSELG 194
           ASW EDR R LLKKYG+IE I+  RNMPSA  KDF F+TFDTHDA + CAKSINN ELG
Sbjct: 218 ASWDEDRFRVLLKKYGNIEKIELARNMPSARRKDFGFVTFDTHDAAVACAKSINNVELG 276



 Score = 26.9 bits (58), Expect(2) = 1e-17
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query: 259 QAKVWCQIVKTRQRENVPHS---DFNSRHGAARGFRGP 363
           + KV  ++ +  QR    H+   DF S HGA+R  RGP
Sbjct: 281 KVKVRARLSRPLQRGKGKHASRGDFQSGHGASRVVRGP 318


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
           gi|297734640|emb|CBI16691.3| unnamed protein product
           [Vitis vinifera]
          Length = 812

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +3

Query: 18  ASWAEDRVRQLLKKYGDIEIIKFFRNMPSAM*KDFKFITFDTHDATI*CAKSINNSELG 194
           ASW EDRVR+LLKKYG+IE I+  RNMPSA  KDF F+TFDTHDA + CAKSINN+ELG
Sbjct: 418 ASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELG 476


>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
          Length = 342

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +3

Query: 18  ASWAEDRVRQLLKKYGDIEIIKFFRNMPSAM*KDFKFITFDTHDATI*CAKSINNSELG 194
           ASW EDRVR+LLKKYG+IE I+  RNMPSA  KDF F+TFDTHDA + CAKSINN+ELG
Sbjct: 217 ASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELG 275


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = +3

Query: 18  ASWAEDRVRQLLKKYGDIEIIKFFRNMPSAM*KDFKFITFDTHDATI*CAKSINNSELG 194
           ASW EDRVR LLKKYG+IE I+  RNMPSA  KDF F+TFDTHDA + CAKSINN+ELG
Sbjct: 218 ASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAAVTCAKSINNAELG 276


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
           gi|223534154|gb|EEF35870.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 784

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = +3

Query: 18  ASWAEDRVRQLLKKYGDIEIIKFFRNMPSAM*KDFKFITFDTHDATI*CAKSINNSELG 194
           ASW EDRVR+LLKK+G+IE I+  RNMPSA  KDF F+TFD+HDA + CAKSINN+ELG
Sbjct: 399 ASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNAELG 457


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