BLASTX nr result

ID: Angelica23_contig00040837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040837
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11

>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = +3

Query: 51  YIPSNILPTCSSTQSLAQTKQAHAVALLHGLLPHSVSISASLILRYAHFKSPQAFTILFD 230
           YI  N+L  CS  QSL QTKQ HA+ +L+G LP SVS+ ASLIL YA F+ P +F  LF+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 231 QAVAHCRNA 257
           Q   +CR A
Sbjct: 115 QTFQNCRTA 123


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +3

Query: 6   LSLHAHF--FLSLKEPHYIPSNILPTCSSTQSLAQTKQAHAVALLHGLLPHSVSISASLI 179
           L+ + HF  F S       P N+L  C+   +L+QTKQ HA +LLHG LP SVS+ ASLI
Sbjct: 18  LTKNTHFSSFFSTSLQTSNPPNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLI 77

Query: 180 LRYAHFKSPQAFTILFDQAVAHCRNA 257
           L+YA F  P    +LF  +VA+ R+A
Sbjct: 78  LQYASFGHPSNSLLLFQHSVAYSRSA 103


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