BLASTX nr result
ID: Angelica23_contig00040682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00040682
(481 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 220 1e-63
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 218 9e-63
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 218 9e-63
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 216 2e-62
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 217 2e-62
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 220 bits (561), Expect(2) = 1e-63
Identities = 105/130 (80%), Positives = 118/130 (90%)
Frame = +3
Query: 3 MDEEINAIQRNDTWELTSLPKGKKAIDVKWVYKIKKNSKGNVEKYKARLVAKGYSQKAGI 182
MDEEI +IQ+NDTWELTSLP G KAI VKWVYK KKNSKG VE+YKARLVAKGYSQ+AGI
Sbjct: 822 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 881
Query: 183 DFEEVFAPVARIETIRLIISLAAQQGWKIHQMDVKSAFLNGTLEEEIYVNQPLGYTIKGQ 362
D++EVFAPVAR+ET+RLIISLAAQ WKIHQMDVKSAFLNG LEEE+Y+ QP GY +KG+
Sbjct: 882 DYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGE 941
Query: 363 EDKVLKLKKA 392
EDKVL+LKKA
Sbjct: 942 EDKVLRLKKA 951
Score = 48.1 bits (113), Expect(2) = 1e-63
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +2
Query: 377 KIKESIYGLKQAPRA*YSCVDKYFPKNGFTRCPYE 481
++K+++YGLKQAPRA + +DKYF + F +CPYE
Sbjct: 947 RLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 981
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 218 bits (556), Expect(2) = 9e-63
Identities = 103/129 (79%), Positives = 117/129 (90%)
Frame = +3
Query: 3 MDEEINAIQRNDTWELTSLPKGKKAIDVKWVYKIKKNSKGNVEKYKARLVAKGYSQKAGI 182
MDEEI +IQ+NDTWELTSLP G KAI VKWVYK KKNSKG VE+YKARLVAKGYSQ+AGI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 913
Query: 183 DFEEVFAPVARIETIRLIISLAAQQGWKIHQMDVKSAFLNGTLEEEIYVNQPLGYTIKGQ 362
D++E+FAPVAR+ET+RLIISLAAQ WKIHQMDVKSAFLNG LEEE+Y+ QP GY +KG+
Sbjct: 914 DYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGE 973
Query: 363 EDKVLKLKK 389
EDKVL+LKK
Sbjct: 974 EDKVLRLKK 982
Score = 47.0 bits (110), Expect(2) = 9e-63
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 377 KIKESIYGLKQAPRA*YSCVDKYFPKNGFTRCPYE 481
++K+ +YGLKQAPRA + +DKYF + F +CPYE
Sbjct: 979 RLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 218 bits (556), Expect(2) = 9e-63
Identities = 103/129 (79%), Positives = 117/129 (90%)
Frame = +3
Query: 3 MDEEINAIQRNDTWELTSLPKGKKAIDVKWVYKIKKNSKGNVEKYKARLVAKGYSQKAGI 182
MDEEI +IQ+NDTWELTSLP G KAI VKWVYK KKNSKG VE+YKARLVAKGYSQ+AGI
Sbjct: 351 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 410
Query: 183 DFEEVFAPVARIETIRLIISLAAQQGWKIHQMDVKSAFLNGTLEEEIYVNQPLGYTIKGQ 362
D++E+FAPVAR+ET+RLIISLAAQ WKIHQMDVKSAFLNG LEEE+Y+ QP GY +KG+
Sbjct: 411 DYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGE 470
Query: 363 EDKVLKLKK 389
EDKVL+LKK
Sbjct: 471 EDKVLRLKK 479
Score = 47.0 bits (110), Expect(2) = 9e-63
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 377 KIKESIYGLKQAPRA*YSCVDKYFPKNGFTRCPYE 481
++K+ +YGLKQAPRA + +DKYF + F +CPYE
Sbjct: 476 RLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 510
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 216 bits (551), Expect(2) = 2e-62
Identities = 103/130 (79%), Positives = 116/130 (89%)
Frame = +3
Query: 3 MDEEINAIQRNDTWELTSLPKGKKAIDVKWVYKIKKNSKGNVEKYKARLVAKGYSQKAGI 182
MDEEI +IQ+NDTWELTSLP G K I VKWVYK KKNSKG VE+YKARLVAKGY Q+AGI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGI 913
Query: 183 DFEEVFAPVARIETIRLIISLAAQQGWKIHQMDVKSAFLNGTLEEEIYVNQPLGYTIKGQ 362
D++EVFAPVAR+ET+RLIISLAAQ WKIHQMDVKSAFLNG LEEE+Y+ QP GY +KG+
Sbjct: 914 DYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGE 973
Query: 363 EDKVLKLKKA 392
EDKVL+LKKA
Sbjct: 974 EDKVLRLKKA 983
Score = 48.1 bits (113), Expect(2) = 2e-62
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +2
Query: 377 KIKESIYGLKQAPRA*YSCVDKYFPKNGFTRCPYE 481
++K+++YGLKQAPRA + +DKYF + F +CPYE
Sbjct: 979 RLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 217 bits (553), Expect(2) = 2e-62
Identities = 103/129 (79%), Positives = 116/129 (89%)
Frame = +3
Query: 3 MDEEINAIQRNDTWELTSLPKGKKAIDVKWVYKIKKNSKGNVEKYKARLVAKGYSQKAGI 182
MDEEI +IQ+NDTWELTSLP G KAI VKWVYK KKNSKG VE+YKARLVAKGYSQ+ GI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGI 913
Query: 183 DFEEVFAPVARIETIRLIISLAAQQGWKIHQMDVKSAFLNGTLEEEIYVNQPLGYTIKGQ 362
D++EVFAPVAR+ET+RLIISLAAQ WKIHQMDVKSAFLNG LEEE+Y+ QP GY +KG+
Sbjct: 914 DYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGE 973
Query: 363 EDKVLKLKK 389
EDKVL+LKK
Sbjct: 974 EDKVLRLKK 982
Score = 47.0 bits (110), Expect(2) = 2e-62
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 377 KIKESIYGLKQAPRA*YSCVDKYFPKNGFTRCPYE 481
++K+ +YGLKQAPRA + +DKYF + F +CPYE
Sbjct: 979 RLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013