BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040593
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517091.1| pentatricopeptide repeat-containing protein,...   129   2e-28
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t...   122   4e-26
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...   121   5e-26
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26

>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/133 (45%), Positives = 91/133 (68%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           DVVSW  +ID  +    + + L  FD ML+  VEPN VT++ +LSAC++ GDL +GK IH
Sbjct: 323 DVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISVLSACSQKGDLSLGKSIH 382

Query: 226 LYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDRK 47
            Y+ + ++++S NL N +L MYVK G + +A ++FD M  K VFSWTSM++GY + G+ +
Sbjct: 383 EYVRRKNLNLSVNLMNAILDMYVKCGCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGELE 442

Query: 46  SANVFFDRMPEKD 8
            A  FFD MP+++
Sbjct: 443 IARKFFDDMPKRN 455



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           +VVSWN +I   +Q     + +  F  M+  G+ P   TL+ +LSAC + G L +G+LIH
Sbjct: 455 NVVSWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIH 514

Query: 226 LY-IVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDR 50
           +Y I +     S  + N L+ MY K G +D+A ++F+ M  + + SW SMI      G  
Sbjct: 515 MYHIERKQKGTSVIIANALIDMYAKCGVIDAAARVFNGMPGRDLVSWNSMIAACASHGHA 574

Query: 49  KSANVFFDRM 20
           K A + F +M
Sbjct: 575 KQALLMFGQM 584


>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1024

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/134 (45%), Positives = 88/134 (65%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           DVV+W  +ID  A   C +E +  F+ ML+  VEPN VTL+ ++SAC+  G+L +GK +H
Sbjct: 322 DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVH 381

Query: 226 LYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDRK 47
             + + ++  S +L N LL MYVK   +  A +LFDRM  K V+SWTSM++GY + GD +
Sbjct: 382 EKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLE 441

Query: 46  SANVFFDRMPEKDA 5
           SA  FFD+ P K+A
Sbjct: 442 SARRFFDQTPRKNA 455



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           + V W+ +I   +Q     E L  F EM+  GV P   TL+ +LSAC +   L +G  IH
Sbjct: 454 NAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIH 513

Query: 226 LY-IVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDR 50
            Y +V   I +S  L N ++ MY K G +D+A ++F  M  + + SW +MI GY   G  
Sbjct: 514 QYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRA 573

Query: 49  KSANVFFDRM 20
           K A   FD+M
Sbjct: 574 KQAINVFDQM 583


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/133 (44%), Positives = 87/133 (65%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           DVV+W  +I+  A+    DE +  F+ ML   V+PN VT++ LLSAC++ GD  +GK +H
Sbjct: 217 DVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLH 276

Query: 226 LYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDRK 47
            +I + DI  S NL N +L MYVK G + +A ++F+ M  + VFSWTS+++GY + GD  
Sbjct: 277 EHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLG 336

Query: 46  SANVFFDRMPEKD 8
           SA   FD MPE++
Sbjct: 337 SARKLFDEMPERN 349



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEML-VCGVEPNSVTLLGLLSACTKSGDLCVGKLI 230
           ++VSWN +I   +Q     E L  F  M+ V G+ P   TL+ +LSA  + G L +G+ I
Sbjct: 349 NIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEI 408

Query: 229 HL-YIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGD 53
           H  ++ K  I VS  L N ++ MY K G +D+A KLF  M  K + SW SMI  Y   G 
Sbjct: 409 HCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGH 468

Query: 52  RKSANVFFDRM 20
            K A   FD+M
Sbjct: 469 AKKALTLFDQM 479



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/134 (28%), Positives = 61/134 (45%)
 Frame = -2

Query: 409 PDVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLI 230
           P+   WN +I    +          F +M+    E +S + +  L AC +  +  VG  +
Sbjct: 115 PNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAV 174

Query: 229 HLYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDR 50
           H  I K        + NGL+  YV+ G +  A ++FD  +VK V +WT+MI+GY +    
Sbjct: 175 HSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWL 234

Query: 49  KSANVFFDRMPEKD 8
             A   F+ M   D
Sbjct: 235 DEAIALFNSMLSSD 248


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/133 (45%), Positives = 83/133 (62%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           DVVSWN +I      GC D+ L  F  M    V PN VT++G+LSAC K  DL  G+ + 
Sbjct: 197 DVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVC 256

Query: 226 LYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDRK 47
            YI +N I+V+  + N +L MYVK G ++ A +LFD+M  K +FSWT+MIDGY ++ D  
Sbjct: 257 HYIERNGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFD 316

Query: 46  SANVFFDRMPEKD 8
           +A   FD MP +D
Sbjct: 317 AARSVFDAMPRQD 329



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEM-LVCGVEPNSVTLLGLLSACTKSGDLCVGKLI 230
           D+ +WNV+I    Q G   E L  F E+ L    +P+ VTL+  LSAC + G + +G  I
Sbjct: 329 DISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWI 388

Query: 229 HLYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDR 50
           H+YI K DI ++ +L   L+ MY K G+++ A  +F  ++ + VF W++MI G    G  
Sbjct: 389 HVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRG 448

Query: 49  KSANVFFDRMPE 14
           ++A   F  M E
Sbjct: 449 RAAIDLFFEMQE 460



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
 Frame = -2

Query: 409 PDVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVE-PNSVTLLGLLSACTKSGDLCVGKL 233
           P++ +WN +I   A        L  F  ML    + PN  T   ++ A      L   + 
Sbjct: 94  PNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAAGVASLPFSQA 153

Query: 232 IHLYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGD 53
           IH   +K  +     + N L+H Y   GD+DSA  +F ++  K V SW SMI G++  G 
Sbjct: 154 IHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGC 213

Query: 52  RKSANVFFDRM 20
              A   F  M
Sbjct: 214 PDKALELFQLM 224


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/133 (44%), Positives = 82/133 (61%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEMLVCGVEPNSVTLLGLLSACTKSGDLCVGKLIH 227
           DVVSWN +I    Q GC +E L  F EM    V+PN +T++G+LSAC K  D   G+ +H
Sbjct: 201 DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260

Query: 226 LYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDRK 47
            YI +N I  S  L N +L MY K G ++ A++LFD+M  K + SWT+M+ GY + G+  
Sbjct: 261 SYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYD 320

Query: 46  SANVFFDRMPEKD 8
           +A   FD MP +D
Sbjct: 321 AAQGIFDAMPNQD 333



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = -2

Query: 406 DVVSWNVVIDDLAQCGCFDEVLGAFDEM-LVCGVEPNSVTLLGLLSACTKSGDLCVGKLI 230
           D+ +WN +I    QCG   E L  F E+ L    +P+ VTL+  LSAC + G + +G  I
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392

Query: 229 HLYIVKNDIHVSGNLGNGLLHMYVKFGDMDSAEKLFDRMNVKTVFSWTSMIDGYIQKGDR 50
           H+YI K  + ++ +L   L+ MY K GD+  A  +F  +  K VF W++MI G    G  
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452

Query: 49  KSANVFFDRMPE 14
           K A   F +M E
Sbjct: 453 KDAIALFSKMQE 464