BLASTX nr result

ID: Angelica23_contig00040530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040530
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    64   2e-08
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    60   4e-07
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    60   5e-07
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 47/79 (59%)
 Frame = -2

Query: 677 VKNSWSKLLSVEQPGVLGSFKIAYPVAFSKTKADFLLEVDETKLMWYDRENNKVKDVPVH 498
           VK SWSKL SV +  V+G  +   P+A+SK+  + L+E D   L WYD +  +V +V + 
Sbjct: 278 VKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQ 337

Query: 497 GVPVPSELLVYTESLVQLN 441
           GVP+  E  +   SLV LN
Sbjct: 338 GVPITFEAEICVGSLVPLN 356


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = -2

Query: 680 GVKNSWSKLLSVEQPGVLGSFKIAYPVAFSKTKADFLLEVDETKLMWYDRENNKVKDVPV 501
           G+K SW K+ SV+    +G+F    P+ +SK     LLEV++ KL+WYD +N   K V +
Sbjct: 301 GMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHAKVVKI 360

Query: 500 HGVPVPSELLVYTESLVQLNHDFKPG 423
            G P      +Y ESLV++N   + G
Sbjct: 361 RGGPNSYGSEMYVESLVRINDGDRNG 386


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 31/80 (38%), Positives = 48/80 (60%)
 Frame = -2

Query: 680 GVKNSWSKLLSVEQPGVLGSFKIAYPVAFSKTKADFLLEVDETKLMWYDRENNKVKDVPV 501
           GVK SW+KL SV Q  V+G  +   P+A+SK+  + L+E D   L WYD +  +VK+  +
Sbjct: 284 GVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RI 342

Query: 500 HGVPVPSELLVYTESLVQLN 441
            G+P   E   + ESL+ ++
Sbjct: 343 PGIPYSFEADTFVESLISVS 362


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -2

Query: 680 GVKNSWSKLLSVEQPGVLGSFKIAYPVAFSKTKADFLLEVDETKLMWYDRENNKVKDVPV 501
           GV+ SW KLL+V Q   +GS K   P+ +SKT    LL  +  KL+WYD +   V D  +
Sbjct: 79  GVQESWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVI 138

Query: 500 HGVPVPSELLVYTESLVQLN 441
            G+P   +     ESL+ ++
Sbjct: 139 DGLPHSFDAETLVESLISVD 158


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 32/80 (40%), Positives = 44/80 (55%)
 Frame = -2

Query: 680 GVKNSWSKLLSVEQPGVLGSFKIAYPVAFSKTKADFLLEVDETKLMWYDRENNKVKDVPV 501
           GVK SW K+ SV     + +F    P+ +SK     LLEV+  KL+WYD +N   K V V
Sbjct: 293 GVKESWCKMFSVHAIKWISAFMFLRPLVYSKGGDMVLLEVNGEKLLWYDWKNKHAKVVRV 352

Query: 500 HGVPVPSELLVYTESLVQLN 441
            G P      +Y ESL+++N
Sbjct: 353 RGGPSSFGSEMYVESLIRIN 372


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