BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040464
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79665.1|AC022314_6 F9C16.13 [Arabidopsis thaliana]               72   2e-14
gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]      70   1e-13
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                   80   1e-13
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]          80   1e-13
gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]              80   1e-13

>gb|AAF79665.1|AC022314_6 F9C16.13 [Arabidopsis thaliana]
          Length = 1172

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 18/114 (15%)
 Frame = +1

Query: 1    KKTEEPKSYSESVYYSRFLSELEPKKTEEALADP-------------EQQEMWKLVPRSK 141
            ++T  P + +E V ++ F+S +EPK  +EAL +              ++ E+W L P+  
Sbjct: 817  RQTTSPTN-AEIVQFACFVSSVEPKDHKEALIEEYCIAAMQEELGQFKRSEVWDLTPQPA 875

Query: 142  NKKVIDAMWVFRIKLDEEGSVTRNKTRLVAKGYSQADG-----THALVARLSTV 288
            +  V+   W+F+ K++E+G V RNK RLVA+GYSQ +G     T A VARL ++
Sbjct: 876  DSNVVGTKWIFKNKINEDGLVVRNKARLVAQGYSQVEGVDFEETFAPVARLKSI 929



 Score = 30.8 bits (68), Expect(2) = 2e-14
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 273  KAIYSLNQAPRKWNDTLSEFYLN 341
            KA+Y L QAPR W + L+ F +N
Sbjct: 966  KALYGLKQAPRAWYERLTTFLVN 988


>gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1577

 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 18/103 (17%)
 Frame = +1

Query: 40   YYSRFLSELEPKKTEEALADPE-------------QQEMWKLVPRSKNKKVIDAMWVFRI 180
            +YS F+S LE K  +EAL DP+             + ++W LV R ++  VI   WVFR 
Sbjct: 1075 HYS-FVSCLERKHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRN 1133

Query: 181  KLDEEGSVTRNKTRLVAKGYSQADG-----THALVARLSTVSI 294
            K DE G V RNK RLVA+G++Q +G     T A VARL  + I
Sbjct: 1134 KQDENGLVVRNKARLVAQGFTQVEGLDFGETFAPVARLEAICI 1176



 Score = 30.4 bits (67), Expect(2) = 1e-13
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 273  KAIYSLNQAPRKWNDTLSEFYLN 341
            KA+Y L QAPR W + L +F L+
Sbjct: 1212 KALYGLRQAPRAWYERLRDFLLS 1234


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
 Frame = +1

Query: 40  YYSRFLSELEPKKTEEALADPE-------------QQEMWKLVPRSKNKKVIDAMWVFRI 180
           +YS F+S +EP + EEAL D +             + E+W LVPR  N+ V+   WVFR 
Sbjct: 545 HYS-FVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRN 602

Query: 181 KLDEEGSVTRNKTRLVAKGYSQADG-----THALVARLSTVSI 294
           K DE G VTRNK RLVAKGYSQ +G     T+A VARL ++ I
Sbjct: 603 KQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRI 645


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
 Frame = +1

Query: 40   YYSRFLSELEPKKTEEALADPE-------------QQEMWKLVPRSKNKKVIDAMWVFRI 180
            +YS F+S +EP + EEAL D +             + E+W LVPR  N+ V+   WVFR 
Sbjct: 1242 HYS-FVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRN 1299

Query: 181  KLDEEGSVTRNKTRLVAKGYSQADG-----THALVARLSTVSI 294
            K DE G VTRNK RLVAKGYSQ +G     T+A VARL ++ I
Sbjct: 1300 KQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRI 1342


>gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]
          Length = 800

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
 Frame = +1

Query: 40  YYSRFLSELEPKKTEEALADPE-------------QQEMWKLVPRSKNKKVIDAMWVFRI 180
           +YS F+S +EP + EEAL D +             + E+W LVPR  N+ V+   WVFR 
Sbjct: 324 HYS-FVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRN 381

Query: 181 KLDEEGSVTRNKTRLVAKGYSQADG-----THALVARLSTVSI 294
           K DE G VTRNK RLVAKGYSQ +G     T+A VARL ++ I
Sbjct: 382 KQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRI 424