BLASTX nr result

ID: Angelica23_contig00040414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040414
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI21441.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,...    90   2e-16
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003609638.1| Pentatricopeptide repeat-containing protein ...    65   4e-09

>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = -2

Query: 235 SAHHLFDNLSQPNVFAWTAMLAFYSRNGMPNECITCYNEMKMNRVFPDKYVLPNVVRACT 56
           SA  LFD LSQPNVFAWTA+L FYSRNG+ +EC+  Y+EMK+  V PDKYV P V RAC 
Sbjct: 76  SAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACG 135

Query: 55  KLLCVKTGMQIHKEAVV 5
           +LL ++ G+Q+HK+ V+
Sbjct: 136 QLLWLEVGIQVHKDVVI 152


>emb|CBI21441.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = -2

Query: 235 SAHHLFDNLSQPNVFAWTAMLAFYSRNGMPNECITCYNEMKMNRVFPDKYVLPNVVRACT 56
           SA  LFD LSQPNVFAWTA+L FYSRNG+ +EC+  Y+EMK+  V PDKYV P V RAC 
Sbjct: 415 SAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACG 474

Query: 55  KLLCVKTGMQIHKEAVV 5
           +LL ++ G+Q+HK+ V+
Sbjct: 475 QLLWLEVGIQVHKDVVI 491


>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 611

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = -2

Query: 235 SAHHLFDNLSQPNVFAWTAMLAFYSRNGMPNECITCYNEMKMNRVFPDKYVLPNVVRACT 56
           SA  LFD + QPNV+AWTA+  FY R+GM ++C+  Y  MK + V PD YV P V+RACT
Sbjct: 48  SAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACT 107

Query: 55  KLLCVKTGMQIHKEAVV 5
           +LL  + G+ IHK+ +V
Sbjct: 108 QLLWFEGGIWIHKDVIV 124


>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 619

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/78 (46%), Positives = 54/78 (69%)
 Frame = -2

Query: 235 SAHHLFDNLSQPNVFAWTAMLAFYSRNGMPNECITCYNEMKMNRVFPDKYVLPNVVRACT 56
           SA  L   +S PNVFA+T++L+F+SR+G+ ++CI  Y E++ N V PD YV P V++AC 
Sbjct: 55  SAVTLLHQISHPNVFAFTSILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACA 114

Query: 55  KLLCVKTGMQIHKEAVVF 2
           +L    +G  +HK+ VVF
Sbjct: 115 QLSRFGSGRGVHKDVVVF 132


>ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510693|gb|AES91835.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 589

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/77 (36%), Positives = 47/77 (61%)
 Frame = -2

Query: 232 AHHLFDNLSQPNVFAWTAMLAFYSRNGMPNECITCYNEMKMNRVFPDKYVLPNVVRACTK 53
           AH LFD +S PNV +W+ ++A Y R G PN  +  +++M+   V P+++    ++ AC+ 
Sbjct: 77  AHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSI 136

Query: 52  LLCVKTGMQIHKEAVVF 2
           L  ++TG +IH    VF
Sbjct: 137 LANLETGRRIHALVEVF 153


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