BLASTX nr result

ID: Angelica23_contig00040312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040312
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   171   4e-41
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   164   5e-39
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   161   6e-38
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   157   1e-36
ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228...   156   1e-36

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/89 (88%), Positives = 86/89 (96%)
 Frame = -3

Query: 271  IPDKYPIPVIEELLDELHGAKVFTKLDLKAGYHQILVRPEDTHKTAFRTHNGHYEFLVMP 92
            +PDKYPIPVI+ELLDELHGA VF+KLDL+AGYHQILVRPEDTHKTAFRTH GHYEFLVMP
Sbjct: 755  VPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYEFLVMP 814

Query: 91   FGLMNAPATFQSLMNDVFRPYLRKFVLVF 5
            FGL NAPATFQSLMN+VFRP+LR+FVLVF
Sbjct: 815  FGLTNAPATFQSLMNEVFRPFLRRFVLVF 843


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 271 IPDKYPIPVIEELLDELHGAKVFTKLDLKAGYHQILVRPEDTHKTAFRTHNGHYEFLVMP 92
           +PDKYPIP+I+ELLDELHGA VF+KLDLK+GYHQI ++P D HKTAFRTH GHYEFLVMP
Sbjct: 687 VPDKYPIPIIDELLDELHGACVFSKLDLKSGYHQIKMKPSDVHKTAFRTHEGHYEFLVMP 746

Query: 91  FGLMNAPATFQSLMNDVFRPYLRKFVLVFF 2
           FGL NAPATFQ+LMN+VF+PYLRKFVLVFF
Sbjct: 747 FGLTNAPATFQALMNEVFKPYLRKFVLVFF 776


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/90 (82%), Positives = 83/90 (92%)
 Frame = -3

Query: 271 IPDKYPIPVIEELLDELHGAKVFTKLDLKAGYHQILVRPEDTHKTAFRTHNGHYEFLVMP 92
           +PDKYPIPVI+ELLDEL G+ VF+KLDLK+GYHQIL++ ED  KTAFRTH GHYEFLVMP
Sbjct: 523 VPDKYPIPVIDELLDELQGSTVFSKLDLKSGYHQILMKKEDVQKTAFRTHEGHYEFLVMP 582

Query: 91  FGLMNAPATFQSLMNDVFRPYLRKFVLVFF 2
           FGL NAPATFQ++MNDVFRPYLRKFVLVFF
Sbjct: 583 FGLTNAPATFQAVMNDVFRPYLRKFVLVFF 612


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/90 (80%), Positives = 82/90 (91%)
 Frame = -3

Query: 271 IPDKYPIPVIEELLDELHGAKVFTKLDLKAGYHQILVRPEDTHKTAFRTHNGHYEFLVMP 92
           +PDK+PIPVIEELLDELHGA+ ++KLDLK+GYHQ+ V+ ED HKTAFRTH  HYE+LVMP
Sbjct: 446 VPDKFPIPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFRTHEDHYEYLVMP 505

Query: 91  FGLMNAPATFQSLMNDVFRPYLRKFVLVFF 2
           FGLMNAP+TFQSLMNDVFR  LRKFVLVFF
Sbjct: 506 FGLMNAPSTFQSLMNDVFRLLLRKFVLVFF 535


>ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
          Length = 703

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/90 (78%), Positives = 79/90 (87%)
 Frame = -3

Query: 271 IPDKYPIPVIEELLDELHGAKVFTKLDLKAGYHQILVRPEDTHKTAFRTHNGHYEFLVMP 92
           IPDKYPIPV++ELLDEL GA +F+K+DLK+GYH I VR  D HKTAFRTH GHYEFLVMP
Sbjct: 588 IPDKYPIPVVDELLDELFGATIFSKIDLKSGYHHIRVRATDVHKTAFRTHEGHYEFLVMP 647

Query: 91  FGLMNAPATFQSLMNDVFRPYLRKFVLVFF 2
           FGL NAP TFQS+MND+ RPYLRKFVLVFF
Sbjct: 648 FGLKNAPTTFQSVMNDILRPYLRKFVLVFF 677


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