BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040286
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     173   1e-41
gb|ACB28472.1| polyprotein [Ananas comosus]                           171   4e-41
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   170   1e-40
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   165   3e-39
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   152   2e-35

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  173 bits (439), Expect = 1e-41
 Identities = 75/122 (61%), Positives = 93/122 (76%)
 Frame = -3

Query: 366  HGWPKSIVSDRDPIFLSNF*KGLFSIHGTEFKLSSSYHPQTDGQSEVVNKCLETYLRCMC 187
            HG PK I SDRDP FLS   + LF +HG + + S++YHPQTDGQ+EV NK LETYLRCM 
Sbjct: 1266 HGMPKDITSDRDPTFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMT 1325

Query: 186  GKNPKDWNAWLPTAEWWYNTHFHTSTMITPYEIVYNQAPPLHLPYLRGESSNEVLDRTLQ 7
               P+ W+ WLP AEWWYNT FH++   TP+EIVY Q PP+HLPYL GESS+ V+DR+LQ
Sbjct: 1326 ADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQ 1385

Query: 6    RK 1
            ++
Sbjct: 1386 KR 1387


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  171 bits (434), Expect = 4e-41
 Identities = 75/119 (63%), Positives = 92/119 (77%)
 Frame = -3

Query: 366  HGWPKSIVSDRDPIFLSNF*KGLFSIHGTEFKLSSSYHPQTDGQSEVVNKCLETYLRCMC 187
            HG P+SIVSDRD IF+S F + LF     +  LS++YHPQ+DGQ+EVVN+CLE YLRCM 
Sbjct: 834  HGMPRSIVSDRDTIFVSQFWQELFKRLQVKVNLSTAYHPQSDGQTEVVNRCLENYLRCMA 893

Query: 186  GKNPKDWNAWLPTAEWWYNTHFHTSTMITPYEIVYNQAPPLHLPYLRGESSNEVLDRTL 10
            G+ PK+W  WLP AEWWYNT +H+ST  TPYE+VY Q PPLH+PYL G+S  E +DRTL
Sbjct: 894  GERPKEWAKWLPLAEWWYNTSYHSSTKATPYEVVYGQPPPLHVPYLAGDSLMEAVDRTL 952


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  170 bits (430), Expect = 1e-40
 Identities = 73/122 (59%), Positives = 95/122 (77%)
 Frame = -3

Query: 366  HGWPKSIVSDRDPIFLSNF*KGLFSIHGTEFKLSSSYHPQTDGQSEVVNKCLETYLRCMC 187
            HG P SIVSDRD +F S+F K  F + G E ++SS+YHPQ+DGQ+EVVN+CLE YLRCMC
Sbjct: 1181 HGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMC 1240

Query: 186  GKNPKDWNAWLPTAEWWYNTHFHTSTMITPYEIVYNQAPPLHLPYLRGESSNEVLDRTLQ 7
               P  WN WLP AE+WYNT++H+S+ +TP+E+VY QAPP+HLPYL G+S   V+ R+LQ
Sbjct: 1241 HARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARSLQ 1300

Query: 6    RK 1
             +
Sbjct: 1301 ER 1302


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  165 bits (418), Expect = 3e-39
 Identities = 72/122 (59%), Positives = 94/122 (77%)
 Frame = -3

Query: 366  HGWPKSIVSDRDPIFLSNF*KGLFSIHGTEFKLSSSYHPQTDGQSEVVNKCLETYLRCMC 187
            HG P SIVSDRD +F S F +  F++ G   KL+S+YHPQ+DGQ+EVVN+CLETYLRCMC
Sbjct: 1210 HGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMC 1269

Query: 186  GKNPKDWNAWLPTAEWWYNTHFHTSTMITPYEIVYNQAPPLHLPYLRGESSNEVLDRTLQ 7
               P+ W+ WL  AE+WYNT++H+S+ +TP+EIVY Q PP+HLPYL GES   V+ R+LQ
Sbjct: 1270 HDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQ 1329

Query: 6    RK 1
             +
Sbjct: 1330 ER 1331


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  152 bits (385), Expect = 2e-35
 Identities = 66/119 (55%), Positives = 90/119 (75%)
 Frame = -3

Query: 366  HGWPKSIVSDRDPIFLSNF*KGLFSIHGTEFKLSSSYHPQTDGQSEVVNKCLETYLRCMC 187
            HG P SIVSDRDPIF+SNF K LF + GT+ K+S +YHP+TDGQ+EVVN+CLETYLRC  
Sbjct: 991  HGIPLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLRCFI 1050

Query: 186  GKNPKDWNAWLPTAEWWYNTHFHTSTMITPYEIVYNQAPPLHLPYLRGESSNEVLDRTL 10
               PK+W +W+P AE+W+NT +H +T  TP+E+VY + PP+   +++GE+  E + R L
Sbjct: 1051 ADQPKNWASWIPWAEYWFNTSYHAATGHTPFEMVYGRPPPVITRWVQGETRVEAVQREL 1109