BLASTX nr result
ID: Angelica23_contig00040056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00040056
(309 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,... 120 9e-26
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 116 2e-24
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ... 115 4e-24
emb|CBI23043.3| unnamed protein product [Vitis vinifera] 114 8e-24
>ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|222858467|gb|EEE96014.1|
predicted protein [Populus trichocarpa]
Length = 852
Score = 135 bits (340), Expect = 3e-30
Identities = 65/100 (65%), Positives = 77/100 (77%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N +VVN L+DVYRRC DM A IF KFSV+N LS NTMIV YCE+GDVS A+ LFD M+
Sbjct: 331 NPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMD 390
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMFMNLLMHDGV 304
G+ER LISWNS+ISGYV N MF EA +MF N+LM +G+
Sbjct: 391 VLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGI 430
>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 758
Score = 120 bits (302), Expect = 9e-26
Identities = 57/85 (67%), Positives = 69/85 (81%)
Frame = +2
Query: 35 VYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQMESNGLERDLIS 214
V +RC DM++AV IFS+FS++N +SYNTMIV YC GDVS A+ FDQME +G++R+ IS
Sbjct: 191 VMKRCGDMDNAVKIFSRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERIS 250
Query: 215 WNSMISGYVDNSMFHEALTMFMNLL 289
WNSMISGYVDN MF EAL MF NLL
Sbjct: 251 WNSMISGYVDNFMFDEALNMFRNLL 275
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/99 (28%), Positives = 54/99 (54%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N V L+++Y +C+D +A +F++ ++A ++N +I Y R L +M+
Sbjct: 317 NTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQ 376
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMFMNLLMHDG 301
+G E ++ +WN +++GYV+N A+ +F MH G
Sbjct: 377 EDGFEPNIYTWNGILAGYVENGHLDLAMQLFSE--MHTG 413
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 116 bits (290), Expect = 2e-24
Identities = 57/90 (63%), Positives = 69/90 (76%)
Frame = +2
Query: 35 VYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQMESNGLERDLIS 214
V +RC DM SA+ IFS FSV+N +SYNTMIV YCE G+V A+ LFDQME G +D IS
Sbjct: 186 VIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTIS 243
Query: 215 WNSMISGYVDNSMFHEALTMFMNLLMHDGV 304
WNSMISGY DN +F EAL+MF +LLM +G+
Sbjct: 244 WNSMISGYADNLLFDEALSMFRDLLMEEGI 273
Score = 59.3 bits (142), Expect = 3e-07
Identities = 26/94 (27%), Positives = 52/94 (55%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N V L+++Y +C+D+ +A F + ++ ++N +I Y + N + L +M+
Sbjct: 311 NTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMK 370
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMFMNL 286
+G E ++ +WN +ISG+V+N AL +F +
Sbjct: 371 GDGFEPNVYTWNGIISGHVENGHNELALRLFTEM 404
>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 115 bits (288), Expect = 4e-24
Identities = 58/96 (60%), Positives = 69/96 (71%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N V N L+ +YRRC DM SA IFSKF+ + A SYNTMIV Y E G+V A+ LF QME
Sbjct: 304 NGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQME 363
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMFMNLLM 292
G+ERD ISWN MISG+VDN MF +AL +F +LLM
Sbjct: 364 QEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLM 399
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N V L+++Y +C D+ +A F + S ++ ++N +I Y + R L ++M+
Sbjct: 440 NSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMK 499
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMF 277
S+G E ++ +WNS+++G V+N + A+ +F
Sbjct: 500 SDGFEPNVYTWNSILAGLVENKQYDLAMQLF 530
>emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 114 bits (285), Expect = 8e-24
Identities = 62/100 (62%), Positives = 70/100 (70%)
Frame = +2
Query: 5 NQIVVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQME 184
N VVNGL+DVYRRC DM SA+ IFS FSV+N +SYNTMIV YCE G+V A+ LFDQME
Sbjct: 80 NPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQME 139
Query: 185 SNGLERDLISWNSMISGYVDNSMFHEALTMFMNLLMHDGV 304
G +D ISWNSMISGY DN + E L L DGV
Sbjct: 140 LVG--KDTISWNSMISGYADNLLKCEDLKAAQ--LAFDGV 175
Score = 55.1 bits (131), Expect = 6e-06
Identities = 24/91 (26%), Positives = 50/91 (54%)
Frame = +2
Query: 14 VVNGLLDVYRRCKDMNSAVNIFSKFSVQNALSYNTMIVAYCEAGDVSNARRLFDQMESNG 193
+++G D +C+D+ +A F + ++ ++N +I Y + N + L +M+ +G
Sbjct: 151 MISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDG 210
Query: 194 LERDLISWNSMISGYVDNSMFHEALTMFMNL 286
E ++ +WN +ISG+V+N AL +F +
Sbjct: 211 FEPNVYTWNGIISGHVENGHNELALRLFTEM 241