BLASTX nr result

ID: Angelica23_contig00040034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040034
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511212.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256...    80   1e-13
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    79   3e-13
ref|XP_002871294.1| mitochondrial transcription termination fact...    78   9e-13
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13

>ref|XP_002511212.1| conserved hypothetical protein [Ricinus communis]
           gi|223550327|gb|EEF51814.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 423

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/96 (42%), Positives = 68/96 (70%)
 Frame = -3

Query: 295 SEKRMRELLEFFIQELQWSATRLSTTPNVLRYSLKRRIIPRCSVLQALMLNNCNSKRFML 116
           SEK++R+L++FF+ +L  S + +S  PN++  SL++RI+PRCSVL  LM     ++ F L
Sbjct: 319 SEKKIRKLMDFFVNKLNISPSVISKNPNLMLLSLEKRILPRCSVLNILMSKELINEGFKL 378

Query: 115 TSIVTMTEIKFLESFVTAYKDEVPEVMDAYQGKLRF 8
             ++ MTE  F ++ VT Y+D VPE+++A+QG++ F
Sbjct: 379 IYMLRMTEKMFGKNVVTKYQDLVPEIVEAHQGRVEF 414


>ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256578 [Vitis vinifera]
          Length = 463

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 32/98 (32%), Positives = 64/98 (65%)
 Frame = -3

Query: 295 SEKRMRELLEFFIQELQWSATRLSTTPNVLRYSLKRRIIPRCSVLQALMLNNCNSKRFML 116
           SEK++ ++L+F + ++ W    ++  P  +  + ++R++PRCSV++ L+L     K   L
Sbjct: 343 SEKKVTKVLDFLVNKMGWQPAVVARAPVAICLNFEKRVVPRCSVVKVLLLKGLVKKDLRL 402

Query: 115 TSIVTMTEIKFLESFVTAYKDEVPEVMDAYQGKLRFDE 2
              +++TE  FL+ +V  Y+D++P+++D YQGKL+ +E
Sbjct: 403 DHFLSLTEGNFLDKYVIKYEDDIPQLLDLYQGKLKAEE 440


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/96 (35%), Positives = 62/96 (64%)
 Frame = -3

Query: 301 SYSEKRMRELLEFFIQELQWSATRLSTTPNVLRYSLKRRIIPRCSVLQALMLNNCNSKRF 122
           S SEK++   ++F + ++ W  T ++  P+ L YSL++RIIPRCSV + L+L     K  
Sbjct: 299 SLSEKKIMSTMDFLVNKMGWKLTAITKVPSTLSYSLEKRIIPRCSVARVLILKGLVKKDM 358

Query: 121 MLTSIVTMTEIKFLESFVTAYKDEVPEVMDAYQGKL 14
            L + +  TE KFL+ FV  Y++ +P++++ ++G++
Sbjct: 359 GLGAFLRFTEKKFLDRFVIKYQNHIPQLLNLFKGEV 394


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/92 (40%), Positives = 59/92 (64%)
 Frame = -3

Query: 295 SEKRMRELLEFFIQELQWSATRLSTTPNVLRYSLKRRIIPRCSVLQALMLNNCNSKRFML 116
           SE+++   +EFF+ E+  +   ++  P VL +SL++RIIPRCSV + L+ N    + + L
Sbjct: 309 SERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSL 368

Query: 115 TSIVTMTEIKFLESFVTAYKDEVPEVMDAYQG 20
           TS++   E  FLE  V  Y++E+PE+MD Y G
Sbjct: 369 TSLLVPVEKVFLEKLVIKYEEELPELMDVYLG 400


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/94 (37%), Positives = 60/94 (63%)
 Frame = -3

Query: 295 SEKRMRELLEFFIQELQWSATRLSTTPNVLRYSLKRRIIPRCSVLQALMLNNCNSKRFML 116
           SEK++ + L+FF+ ++ W +  +   P +L  SL++RIIPRC V+Q L       K   L
Sbjct: 302 SEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGLIKKDISL 361

Query: 115 TSIVTMTEIKFLESFVTAYKDEVPEVMDAYQGKL 14
            +++   E +FLE FVT +++EVP+++  Y+GK+
Sbjct: 362 NTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKV 395


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