BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00040031
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...   176   1e-42
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...   173   1e-41
gb|ADE77588.1| unknown [Picea sitchensis]                             147   1e-33
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/125 (73%), Positives = 105/125 (84%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           NVISWST+IGGYA+NGES +AL LFSRM+ +GVQPN VTFLAVL ACSH G V EGW YF
Sbjct: 301 NVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYF 360

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAIY 17
           N+M  SD+ N++PRKEHYA MVDLLGRSG+LEEAYNFI+ MPIE D G+W  LLGACAI+
Sbjct: 361 NFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420

Query: 16  HNIDL 2
            NI L
Sbjct: 421 QNIKL 425



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/119 (24%), Positives = 60/119 (50%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           ++++W+ +I      G S +AL+ F  M   G++P+SVT ++ L AC H G +  G   +
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIY 259

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAI 20
            +        +      + + +D+  + G +++A N    MP + +   W+T++G  A+
Sbjct: 260 EFAREE---GIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMP-QRNVISWSTVIGGYAV 314


>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/125 (66%), Positives = 100/125 (80%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           NV+SWSTMI GYA+NG+S  AL LF+ MQ EG++PN VTFL VL ACSHAGLV EG  YF
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAIY 17
           + M  S++ NL+PRKEHYA MVDLLGRSG LEEAY FI+ MP+EPD G+W  LLGACA++
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394

Query: 16  HNIDL 2
            ++ L
Sbjct: 395 RDMIL 399


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/125 (65%), Positives = 99/125 (79%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           NV+SWSTMI GYA+NG+SG AL LF+ MQ EG++PN VTFL VL ACSHAGLV EG  YF
Sbjct: 275 NVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAIY 17
           + M   ++ NL+PRKEHYA MVDLLGRSG LEEAY FI+ M +EPD G+W  LLGACA++
Sbjct: 335 SLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVH 394

Query: 16  HNIDL 2
            ++ L
Sbjct: 395 RDMIL 399


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/125 (56%), Positives = 90/125 (72%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           NV+SW+ MI GY ++G    AL LF++MQ  GV+PN +TF++VL ACSHAGLV EGW  +
Sbjct: 5   NVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEGWKCY 64

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAIY 17
           N MT   +  + P  EHYA MVDLLGR+G+L EA++FI  MPIEP A VW   LG+C I+
Sbjct: 65  NCMTL--DYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIH 122

Query: 16  HNIDL 2
            NI+L
Sbjct: 123 CNIEL 127


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/125 (50%), Positives = 90/125 (72%)
 Frame = -2

Query: 376 NVISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYF 197
           ++I+W+ MI GY ++G    A+  F+ M+  G++P+ V+F+++L ACSH+GL+ EGW +F
Sbjct: 264 DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFF 323

Query: 196 NYMTYSDNCNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLGACAIY 17
           N M   D CN+KP+ EHYA +VDLL RSG L  AY FI+SMPIEPDA +W  LL  C I+
Sbjct: 324 NVM--QDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 381

Query: 16  HNIDL 2
           H++ L
Sbjct: 382 HDVKL 386



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = -2

Query: 373 VISWSTMIGGYALNGESGRALKLFSRMQYEGVQPNSVTFLAVLCACSHAGLVREGWNYFN 194
           V++W+++I  YA  G S  A++LF  M  EGV P+  T   VL AC+  G +  G +  N
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 193 YMTYSDN------CNLKPRKEHYASMVDLLGRSGYLEEAYNFIRSMPIEPDAGVWATLLG 32
           Y+  +D       CN         +++D+  + G +E+A +    MP++ D   W T++G
Sbjct: 124 YIRENDMQSNIFVCN---------ALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIG 173