BLASTX nr result

ID: Angelica23_contig00039420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039420
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
emb|CBI32533.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   136   2e-30
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  152 bits (383), Expect = 4e-35
 Identities = 66/115 (57%), Positives = 91/115 (79%)
 Frame = -1

Query: 350 PNSYSFSVLMASYCEVERMVDALRVWEEMGRKGLERDLVAYNTIIGGFCKVGEVKRAEEF 171
           PN+YS+SVLMA++C+  RM +  ++WEEM  K +E D++AYNTIIGGFC++GE++R EE 
Sbjct: 278 PNAYSYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEEL 337

Query: 170 FLGMEFDGVDGSCVTFEHLISGYCKIWDVDSALLKYTGLCRKGFRPESLTIDEVI 6
           F  ME  G+  +CVT+EHLI+GYC+I DVDSA+L Y  +CRKGFR E+ T+D +I
Sbjct: 338 FREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMI 392


>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  142 bits (358), Expect = 3e-32
 Identities = 62/110 (56%), Positives = 86/110 (78%)
 Frame = -1

Query: 335 FSVLMASYCEVERMVDALRVWEEMGRKGLERDLVAYNTIIGGFCKVGEVKRAEEFFLGME 156
           +SVLMA++C+  RM +  ++WEEM  K +E D++AYNTIIGGFC++GE++R EE F  ME
Sbjct: 90  YSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREME 149

Query: 155 FDGVDGSCVTFEHLISGYCKIWDVDSALLKYTGLCRKGFRPESLTIDEVI 6
             G+  +CVT+EHLI+GYC+I DVDSA+L Y  +CRKGFR E+ T+D +I
Sbjct: 150 LSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMI 199


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/115 (53%), Positives = 86/115 (74%)
 Frame = -1

Query: 350 PNSYSFSVLMASYCEVERMVDALRVWEEMGRKGLERDLVAYNTIIGGFCKVGEVKRAEEF 171
           PN +S+SVLM  + +V R  +  ++WEEM  KG++ D+VAYNT+IGGFCK+GE+++AEE 
Sbjct: 272 PNGFSYSVLMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEEL 331

Query: 170 FLGMEFDGVDGSCVTFEHLISGYCKIWDVDSALLKYTGLCRKGFRPESLTIDEVI 6
              ME +GV+ +CVTFEHLI+GYC + DVDSA+L +  + RKGFR E   +D +I
Sbjct: 332 SREMELNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVLI 386


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = -1

Query: 350 PNSYSFSVLMASYCEVERMVDALRVWEEMGRKGLERDLVAYNTIIGGFCKVGEVKRAEEF 171
           PN+YS+SVLMA++C+  RM DA ++WEE+  + +E D+V+YNTIIGGFC +G+V RAEEF
Sbjct: 276 PNAYSYSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEF 335

Query: 170 FLGMEFDGVDGSCVTFEHLISGYCKIWDVDSALLKYTGLCRKGFRPESLTIDEVIR 3
           F  M   GV  +  T+EHL+ GYC I DVDSA+L Y  + R   RP++ T+D +IR
Sbjct: 336 FREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIR 391


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/114 (54%), Positives = 85/114 (74%)
 Frame = -1

Query: 347 NSYSFSVLMASYCEVERMVDALRVWEEMGRKGLERDLVAYNTIIGGFCKVGEVKRAEEFF 168
           N +S+ VL+A +CE  R+ +A R+W+EM  KG+  D+VAYNTIIGGFCK GEV++AE  F
Sbjct: 281 NGFSYGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLF 340

Query: 167 LGMEFDGVDGSCVTFEHLISGYCKIWDVDSALLKYTGLCRKGFRPESLTIDEVI 6
             M   G++ SCVTFEHLI GYC+I DV+SA+L Y  + R+ FR E+LT++ +I
Sbjct: 341 REMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLI 394


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