BLASTX nr result

ID: Angelica23_contig00039413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039413
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 141   2e-43
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...   135   2e-42
emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]                135   2e-42
gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subc...   135   3e-42
emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]                135   4e-42

>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  141 bits (356), Expect(2) = 2e-43
 Identities = 64/75 (85%), Positives = 69/75 (92%)
 Frame = +3

Query: 156 GLGCILMQHGNVIAYASRQLKPHEQKYPTHDLELAAIVFALKIWRHYLYGEKFEIYTDHK 335
           GLGC+LMQ G V+AYASRQLK HEQ YPTHDLELAA+VFALKIWRHYLYGEK +I+TDHK
Sbjct: 299 GLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK 358

Query: 336 SLKYIFTQKELNMRQ 380
           SLKY FTQKELNMRQ
Sbjct: 359 SLKYFFTQKELNMRQ 373



 Score = 59.3 bits (142), Expect(2) = 2e-43
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +2

Query: 5   QVDTKNEKFVWNEKCEESFQELKKRLVSAPVLILPNDQENFVMYSDA 145
           Q+  K   FVW++ CE+SFQ LK++LV+APVL +P+   NFV+YSDA
Sbjct: 249 QLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDA 295


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score =  135 bits (341), Expect(2) = 2e-42
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +3

Query: 156  GLGCILMQHGNVIAYASRQLKPHEQKYPTHDLELAAIVFALKIWRHYLYGEKFEIYTDHK 335
            GLGC+LMQ G V+AYASRQL+PHE  YPTHDLELAA+V ALKIWRHYLYG + EIYTDHK
Sbjct: 1096 GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 1155

Query: 336  SLKYIFTQKELNMRQ 380
            SLKYIFTQ +LNMRQ
Sbjct: 1156 SLKYIFTQPDLNMRQ 1170



 Score = 62.0 bits (149), Expect(2) = 2e-42
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +2

Query: 17   KNEKFVWNEKCEESFQELKKRLVSAPVLILPNDQENFVMYSDA 145
            K+ K+ W E CE SFQELKKRLVSAPVLILP+ +++F +Y DA
Sbjct: 1050 KDGKYKWTEDCERSFQELKKRLVSAPVLILPDSRKDFQVYCDA 1092


>emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]
          Length = 1454

 Score =  135 bits (341), Expect(2) = 2e-42
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +3

Query: 156  GLGCILMQHGNVIAYASRQLKPHEQKYPTHDLELAAIVFALKIWRHYLYGEKFEIYTDHK 335
            GLGC+LMQ G V+AYASRQL+PHE  YPTHDLELAA+V ALKIWRHYLYG + EIYTDHK
Sbjct: 850  GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 909

Query: 336  SLKYIFTQKELNMRQ 380
            SLKYIFTQ +LNMRQ
Sbjct: 910  SLKYIFTQPDLNMRQ 924



 Score = 61.6 bits (148), Expect(2) = 2e-42
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = +2

Query: 17  KNEKFVWNEKCEESFQELKKRLVSAPVLILPNDQENFVMYSDA 145
           K+ K+ W E CE+SFQELKKRLV+APVLILP+ +++F +Y DA
Sbjct: 804 KDVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKDFQVYCDA 846


>gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1643

 Score =  135 bits (341), Expect(2) = 3e-42
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +3

Query: 156  GLGCILMQHGNVIAYASRQLKPHEQKYPTHDLELAAIVFALKIWRHYLYGEKFEIYTDHK 335
            GLGC+LMQ G V+AYASRQL+PHE  YPTHDLELAA+V ALKIWRHYLYG + EIYTDHK
Sbjct: 1102 GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 1161

Query: 336  SLKYIFTQKELNMRQ 380
            SLKYIFTQ +LNMRQ
Sbjct: 1162 SLKYIFTQPDLNMRQ 1176



 Score = 61.2 bits (147), Expect(2) = 3e-42
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 17   KNEKFVWNEKCEESFQELKKRLVSAPVLILPNDQENFVMYSDA 145
            K  K+ W E CE SFQELKKRLVSAPVLILP+ ++ F +Y DA
Sbjct: 1056 KEVKYKWTEDCERSFQELKKRLVSAPVLILPDSRKGFQVYCDA 1098


>emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
          Length = 1451

 Score =  135 bits (341), Expect(2) = 4e-42
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +3

Query: 156  GLGCILMQHGNVIAYASRQLKPHEQKYPTHDLELAAIVFALKIWRHYLYGEKFEIYTDHK 335
            GLGC+LMQ G V+AYASRQL+PHE  YPTHDLELAA+V ALKIWRHYLYG + EIYTDHK
Sbjct: 850  GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 909

Query: 336  SLKYIFTQKELNMRQ 380
            SLKYIFTQ +LNMRQ
Sbjct: 910  SLKYIFTQPDLNMRQ 924



 Score = 60.8 bits (146), Expect(2) = 4e-42
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 17  KNEKFVWNEKCEESFQELKKRLVSAPVLILPNDQENFVMYSDA 145
           K  K+ W E CE+SFQELKKRLV+APVLILP+ ++ F +Y DA
Sbjct: 804 KEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDA 846


Top