BLASTX nr result

ID: Angelica23_contig00039264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039264
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003593879.1| Pentatricopeptide repeat-containing protein ...   113   1e-23
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   112   3e-23
emb|CBI19389.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23

>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = +2

Query: 56  EKQFETWLDKLKPGFTPLDVQHALKSQSDPDLALDIFRWTAQQRRYKHNADTYLTMLHIS 235
           E QFETW   LKPGFTP DV  A+++QSDPDLALDIFRWTAQQR YKHN  TYLT++ I 
Sbjct: 6   ETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLTVIKIL 65

Query: 236 VSARRYRQAETLVEE 280
           +S RRYRQAETL+EE
Sbjct: 66  ISGRRYRQAETLIEE 80


>ref|XP_003593879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482927|gb|AES64130.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 360

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 56  EKQFETWLDKLKPGFTPLDVQHALKSQSDPDLALDIFRWTAQQRRYKHNADTYLTMLHIS 235
           EKQFETW++ LKPGFTP DV HAL SQSDPDLALDIFRWT+QQR YKH + TY T++   
Sbjct: 40  EKQFETWINHLKPGFTPTDVNHALTSQSDPDLALDIFRWTSQQRSYKHTSLTYHTIITHL 99

Query: 236 VSARRYRQAETLVEE 280
            ++R Y+QAETLVEE
Sbjct: 100 ATSRHYQQAETLVEE 114


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/75 (70%), Positives = 58/75 (77%)
 Frame = +2

Query: 56  EKQFETWLDKLKPGFTPLDVQHALKSQSDPDLALDIFRWTAQQRRYKHNADTYLTMLHIS 235
           E QFETW   LKPGFTP DVQ AL+SQSDPDLA DIFRWTAQQR YKH+  TY  M+ I 
Sbjct: 62  ETQFETWTQTLKPGFTPTDVQTALRSQSDPDLAYDIFRWTAQQRNYKHSHLTYFAMIKIL 121

Query: 236 VSARRYRQAETLVEE 280
           +  +RYR AETLVEE
Sbjct: 122 IDGKRYRHAETLVEE 136


>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/75 (66%), Positives = 62/75 (82%)
 Frame = +2

Query: 56  EKQFETWLDKLKPGFTPLDVQHALKSQSDPDLALDIFRWTAQQRRYKHNADTYLTMLHIS 235
           + QFE+W+  LKPGF+P DV  AL++QSDPDLALDIFRWT QQR Y+HN  TYLTM+ I+
Sbjct: 73  QMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVTYLTMIKIA 132

Query: 236 VSARRYRQAETLVEE 280
           VS +R+R AETL+EE
Sbjct: 133 VSGKRFRHAETLIEE 147


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/75 (66%), Positives = 62/75 (82%)
 Frame = +2

Query: 56  EKQFETWLDKLKPGFTPLDVQHALKSQSDPDLALDIFRWTAQQRRYKHNADTYLTMLHIS 235
           + QFE+W+  LKPGF+P DV  AL++QSDPDLALDIFRWT QQR Y+HN  TYLTM+ I+
Sbjct: 73  QMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVTYLTMIKIA 132

Query: 236 VSARRYRQAETLVEE 280
           VS +R+R AETL+EE
Sbjct: 133 VSGKRFRHAETLIEE 147


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