BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039261
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...    99   3e-19
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...    97   1e-18
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...    97   1e-18
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    96   3e-18
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...    93   2e-17

>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711344|gb|ABF99139.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1394

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/85 (54%), Positives = 60/85 (70%)
 Frame = +2

Query: 47  MLLNEDKVSPKLSQGGGENKFVSNLWYLDNGASNHMTGQRSKFKVLDENVTGQVKFGDGS 226
           M+++ED+V PKL           N+WYLDNGASNHMTG R KF+ LDE++TG V+FGD S
Sbjct: 316 MVVHEDRVWPKLLLADS-GAMAGNVWYLDNGASNHMTGDRKKFRELDESITGSVRFGDAS 374

Query: 227 IVHIKGKGSVAIKCKTGEERILQQL 301
            V IKGKGS+   CK G++ +LQ +
Sbjct: 375 SVQIKGKGSILFSCKNGDQWLLQDV 399


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/99 (46%), Positives = 69/99 (69%)
 Frame = +2

Query: 5   ALLLAEKQDDEGTVMLLNEDKVSPKLSQGGGENKFVSNLWYLDNGASNHMTGQRSKFKVL 184
           ALLLA  +D+  + ++++E++V P+L           ++W+LDNGASNHMTG R+KF+ L
Sbjct: 323 ALLLAVTEDEPASGLVVHEERVWPQLLLADS-GAATGDIWFLDNGASNHMTGDRAKFRDL 381

Query: 185 DENVTGQVKFGDGSIVHIKGKGSVAIKCKTGEERILQQL 301
           D ++TG VKFGD S V I+GKGS+   CK G++ +LQ +
Sbjct: 382 DVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDV 420


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/99 (46%), Positives = 69/99 (69%)
 Frame = +2

Query: 5   ALLLAEKQDDEGTVMLLNEDKVSPKLSQGGGENKFVSNLWYLDNGASNHMTGQRSKFKVL 184
           ALLLA  +D+  + ++++E++V P+L           ++W+LDNGASNHMTG R+KF+ L
Sbjct: 323 ALLLAVTEDEPASGLVVHEERVWPQLLLADS-GAATGDIWFLDNGASNHMTGDRAKFRDL 381

Query: 185 DENVTGQVKFGDGSIVHIKGKGSVAIKCKTGEERILQQL 301
           D ++TG VKFGD S V I+GKGS+   CK G++ +LQ +
Sbjct: 382 DVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDV 420


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1409

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +2

Query: 5   ALLLAEKQDDEGTV---MLLNEDKVSPKL--SQGGGENKFVSNLWYLDNGASNHMTGQRS 169
           ALLLA  +D        +++ E +V PKL  +  GG      ++W+LDNGASNHMTG RS
Sbjct: 322 ALLLAVTEDVPERASCGLVVREQRVWPKLLLADAGGH---AGDVWFLDNGASNHMTGDRS 378

Query: 170 KFKVLDENVTGQVKFGDGSIVHIKGKGSVAIKCKTGEERILQQL 301
           KF+ LDE++TG+VKFGD S V IKGKGS+   CK  ++ +LQ +
Sbjct: 379 KFRELDESITGRVKFGDASTVQIKGKGSILFSCKNDDQWLLQDV 422


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/86 (52%), Positives = 60/86 (69%)
 Frame = +2

Query: 44  VMLLNEDKVSPKLSQGGGENKFVSNLWYLDNGASNHMTGQRSKFKVLDENVTGQVKFGDG 223
           V+ LNE+ V PK  +   +NK     WYLDNGASNHMTG +S F  L+E++ G+VKFGDG
Sbjct: 178 VVFLNEESVMPKKLE---QNKTDDGNWYLDNGASNHMTGDKSFFSELNESIKGRVKFGDG 234

Query: 224 SIVHIKGKGSVAIKCKTGEERILQQL 301
           S V I GKGS+  + KTGE+++L  +
Sbjct: 235 SCVKINGKGSIIFEAKTGEQKLLTNI 260