BLASTX nr result

ID: Angelica23_contig00039188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039188
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arab...    92   4e-17
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 61/89 (68%)
 Frame = -3

Query: 271 LVQALVMLEKCFKLGLVPDVITLTKVVEILCSKGRALXXXXXXXXXERKGGIVDVVAYNT 92
           LVQALV+LEK F LG VPDV+T+TKVVEILC+ GR           E KGG+VDVVAYNT
Sbjct: 260 LVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNT 319

Query: 91  LIXXXXXXXXXXXGYRFLKEMERKGCLPN 5
           L+            +RFLKEMERKGCLPN
Sbjct: 320 LLRGFCRLGKIKVAHRFLKEMERKGCLPN 348


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/89 (59%), Positives = 60/89 (67%)
 Frame = -3

Query: 268 VQALVMLEKCFKLGLVPDVITLTKVVEILCSKGRALXXXXXXXXXERKGGIVDVVAYNTL 89
           VQALV+LEK F LG VPDV+T+TKVVEILC+ GR           E KGG+VDVVA+NTL
Sbjct: 237 VQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTL 296

Query: 88  IXXXXXXXXXXXGYRFLKEMERKGCLPNA 2
           I           G+  LKEMERKGCLPNA
Sbjct: 297 IKGFCKFGKVKLGHGLLKEMERKGCLPNA 325


>ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata] gi|297329905|gb|EFH60324.1| hypothetical protein
           ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]
          Length = 1056

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = -3

Query: 271 LVQALVMLEKCFKLGLVPDVITLTKVVEILCSKGRALXXXXXXXXXERKGGIVDVVAYNT 92
           L+Q++V+LEKCF LGLVPDV+T+TKV+E+LC++GR           E KGG VDVVA NT
Sbjct: 252 LIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 311

Query: 91  LIXXXXXXXXXXXGYRFLKEMERKGCLPN 5
           L+             RF +EMERKG LPN
Sbjct: 312 LVKGYCAVGKMRVAQRFFQEMERKGYLPN 340


>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/89 (56%), Positives = 56/89 (62%)
 Frame = -3

Query: 271 LVQALVMLEKCFKLGLVPDVITLTKVVEILCSKGRALXXXXXXXXXERKGGIVDVVAYNT 92
           LVQALV+LEK F +G VPDV+T TKVV ILC  GR           E  GG+VDVVAYNT
Sbjct: 315 LVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNT 374

Query: 91  LIXXXXXXXXXXXGYRFLKEMERKGCLPN 5
           LI           G+R LK+ME KGCLPN
Sbjct: 375 LIKGFCMLGKAKVGHRVLKDMEIKGCLPN 403


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/88 (53%), Positives = 58/88 (65%)
 Frame = -3

Query: 268 VQALVMLEKCFKLGLVPDVITLTKVVEILCSKGRALXXXXXXXXXERKGGIVDVVAYNTL 89
           VQALV+LEK F +G VPDV+++TKV+EILC+ GR +         E  GG++DVVAYNTL
Sbjct: 258 VQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTL 317

Query: 88  IXXXXXXXXXXXGYRFLKEMERKGCLPN 5
           I           G  FLK+ME KGCLPN
Sbjct: 318 IKGFCGAGKVKVGLHFLKQMENKGCLPN 345


Top